RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
LSG1-204ENST00000460584 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.21
LSG1-204ENST00000460584 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
LSG1-204ENST00000460584 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
LSG1-204ENST00000460584 PARP14Q460N5 1801 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 CYP2D7A0A087X1C5 515 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 VWA5AO00534 786 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 ATP2A1O14983 1001 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 CHGBP05060 677 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 ZNF792Q3KQV3 632 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 SLC39A5Q6ZMH5 540 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
LSG1-204ENST00000460584 DEFB123Q8N688 67 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 KBTBD3Q8NAB2 608 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 NYAP2Q9P242 653 aa13.7□□□□□ -0.22
LSG1-204ENST00000460584 IGKV6D-41A0A0C4DH26 115 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 GSG1L2A8MUP6 293 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 CNGA1P29973 690 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 STAT3P40763 770 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 RTP1P59025 263 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 NCAPG2Q86XI2 1143 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 SPICE1Q8N0Z3 855 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 MKL1Q969V6 931 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
LSG1-204ENST00000460584 KBTBD13C9JR72 458 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 ZFYP08048 801 aaPredicted RBP13.68□□□□□ -0.22
LSG1-204ENST00000460584 RASA1P20936 1047 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 LRRC41Q15345 812 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 GJC2Q5T442 439 aaPredicted RBP13.68□□□□□ -0.22
LSG1-204ENST00000460584 APPBP2Q92624 585 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 TINF2Q9BSI4 451 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
LSG1-204ENST00000460584 BAZ2AQ9UIF9 1905 aaKnown RBP13.68□□□□□ -0.22
LSG1-204ENST00000460584 MYH7P12883 1935 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 DNAJC25-GNG10A0A024R161 153 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 ZNF865P0CJ78 1059 aaPredicted RBP13.67□□□□□ -0.22
LSG1-204ENST00000460584 GNAT2P19087 354 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
LSG1-204ENST00000460584 C20orf194Q5TEA3 1177 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 MMP19Q99542 508 aa13.67□□□□□ -0.22
LSG1-204ENST00000460584 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
LSG1-204ENST00000460584 MYH8P13535 1937 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
LSG1-204ENST00000460584 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
LSG1-204ENST00000460584 PLS1Q14651 629 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 KCTD2Q14681 263 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
LSG1-204ENST00000460584 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 TEX13BQ9BXU2 312 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
LSG1-204ENST00000460584 PRKAG2Q9UGJ0 569 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 COL6A3P12111 3177 aa13.66□□□□□ -0.22
LSG1-204ENST00000460584 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 F5H6K3 240 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
LSG1-204ENST00000460584 ADAMTS4O75173 837 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 NDUFB10O96000 172 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 RARBP10826 455 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 KLRC3Q07444 240 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 FAM47AQ5JRC9 791 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 Q7L0L9 218 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
LSG1-204ENST00000460584 TSEN34Q9BSV6 310 aaKnown RBP13.65□□□□□ -0.22
LSG1-204ENST00000460584 ZNF287Q9HBT7 754 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 PDLIM7Q9NR12 457 aa13.65□□□□□ -0.22
LSG1-204ENST00000460584 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 GPAA1O43292 621 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 FDX1P10109 184 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 AKR1A1P14550 325 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 OAZ1P54368 228 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 NKX3-2P78367 333 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
LSG1-204ENST00000460584 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 RNF180Q86T96 592 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 GMCL1P1Q8NEA9 526 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 TOX2Q96NM4 488 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 SLC38A10Q9HBR0 1119 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 MTMR4Q9NYA4 1195 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 CUL9Q8IWT3 2517 aa13.64□□□□□ -0.23
LSG1-204ENST00000460584 TRIM43BA6NCK2 446 aa13.63□□□□□ -0.23
LSG1-204ENST00000460584 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
LSG1-204ENST00000460584 KIAA0355O15063 1070 aa13.63□□□□□ -0.23
LSG1-204ENST00000460584 PGK2P07205 417 aa13.63□□□□□ -0.23
LSG1-204ENST00000460584 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
LSG1-204ENST00000460584 CCSAPQ6IQ19 270 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms