RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 INF2Q27J81 1249 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 SPATA1Q5VX52 437 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 ZNF397Q8NF99 534 aaPredicted RBP20.57■□□□□ 0.88
HPS3-202ENST00000460120 VPS16Q9H269 839 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 GDAQ9Y2T3 454 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 ARHGAP29Q52LW3 1261 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 SH3RF1Q7Z6J0 888 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 IQUBQ8NA54 791 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 MNS1Q8NEH6 495 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 SCN7AQ01118 1682 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 RREB1Q92766 1687 aa20.57■□□□□ 0.88
HPS3-202ENST00000460120 PES1O00541 588 aaKnown RBP20.56■□□□□ 0.88
HPS3-202ENST00000460120 PCP11498 1178 aaKnown RBP20.56■□□□□ 0.88
HPS3-202ENST00000460120 ERCC5P28715 1186 aaPredicted RBP20.56■□□□□ 0.88
HPS3-202ENST00000460120 FAM196AQ6ZSG2 479 aa20.56■□□□□ 0.88
HPS3-202ENST00000460120 PPFIBP1Q86W92 1011 aa20.56■□□□□ 0.88
HPS3-202ENST00000460120 ZNF444Q8N0Y2 327 aaPredicted RBP20.56■□□□□ 0.88
HPS3-202ENST00000460120 SLC35G1Q2M3R5 365 aa20.56■□□□□ 0.88
HPS3-202ENST00000460120 L2HGDHQ9H9P8 463 aa20.56■□□□□ 0.88
HPS3-202ENST00000460120 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
HPS3-202ENST00000460120 CCDC194A0A1B0GVG4 234 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 AKR1B15C9JRZ8 316 aaPredicted RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 CCP110O43303 1012 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 KCNJ6P48051 423 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 DHX8Q14562 1220 aaKnown RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 SPTY2D1Q68D10 685 aaPredicted RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 SMAP1Q8IYB5 467 aaPredicted RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 CNBD1Q8NA66 436 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 TAB2Q9NYJ8 693 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 A0A1B0GTH6 734 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 BMP15O95972 392 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 WWC2Q6AWC2 1192 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 NOL10Q9BSC4 688 aaKnown RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 TMEM60Q9H2L4 133 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 ZSWIM4Q9H7M6 989 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 MRPL44Q9H9J2 332 aaKnown RBP20.55■□□□□ 0.88
HPS3-202ENST00000460120 MYO1BO43795 1136 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 CASP14P31944 242 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 STAT6P42226 847 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 SBK1Q52WX2 424 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 ZBTB9Q96C00 473 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 GSDMAQ96QA5 445 aa20.55■□□□□ 0.88
HPS3-202ENST00000460120 COL5A3P25940 1745 aaPredicted RBP20.54■□□□□ 0.88
HPS3-202ENST00000460120 A0A1B0GUL6 1792 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 CYTH3O43739 400 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 ZSCAN20P17040 1043 aaPredicted RBP20.54■□□□□ 0.88
HPS3-202ENST00000460120 E2F4Q16254 413 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 APTXQ7Z2E3 356 aaKnown RBP20.54■□□□□ 0.88
HPS3-202ENST00000460120 MAD2L2Q9UI95 211 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 TRIM49BA6NDI0 452 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 UFL1O94874 794 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 CASQ1P31415 396 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 PDXDC2PQ6P474 469 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 AMOTL1Q8IY63 956 aa20.54■□□□□ 0.88
HPS3-202ENST00000460120 STX10O60499 249 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 GPSM2P81274 684 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 OGFRQ9NZT2 677 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 N4BP3O15049 544 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 BTDP43251 543 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 GRAPQ13588 217 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 RAD9BQ6WBX8 426 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 GRAPLQ8TC17 118 aaPredicted RBP20.53■□□□□ 0.88
HPS3-202ENST00000460120 NELFBQ8WX92 580 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 TMEM47Q9BQJ4 181 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 ST7Q9NRC1 585 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
HPS3-202ENST00000460120 DDX41Q9UJV9 622 aaKnown RBP20.53■□□□□ 0.88
HPS3-202ENST00000460120 PCDHA4Q9UN74 947 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 PARP3Q9Y6F1 533 aa20.53■□□□□ 0.88
HPS3-202ENST00000460120 USP17L2Q6R6M4 530 aa20.52■□□□□ 0.88
HPS3-202ENST00000460120 PHLPP2Q6ZVD8 1323 aa20.52■□□□□ 0.88
HPS3-202ENST00000460120 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
HPS3-202ENST00000460120 UBXN4Q92575 508 aa20.52■□□□□ 0.88
HPS3-202ENST00000460120 RPGRQ92834 1020 aaKnown RBP20.52■□□□□ 0.88
HPS3-202ENST00000460120 BAG3O95817 575 aa20.52■□□□□ 0.87
HPS3-202ENST00000460120 FXR1P51114 621 aaKnown RBP eCLIP20.52■□□□□ 0.87
HPS3-202ENST00000460120 VPS72Q15906 364 aa20.52■□□□□ 0.87
HPS3-202ENST00000460120 ZNF446Q9NWS9 450 aa20.52■□□□□ 0.87
HPS3-202ENST00000460120 USP21Q9UK80 565 aa20.52■□□□□ 0.87
HPS3-202ENST00000460120 F8W031 263 aaPredicted RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 RPN1P04843 607 aaKnown RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 EIF6P56537 245 aaKnown RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 KRT31Q15323 416 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 FILIP1LQ4L180 1135 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 RC3H1Q5TC82 1133 aaKnown RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 ZNF804AQ7Z570 1209 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 FEZ1Q99689 392 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 PCDHA6Q9UN73 950 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 PCDHA8Q9Y5H6 950 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 CALML3P27482 149 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 TXLNAP40222 546 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 CDKAL1Q5VV42 579 aa20.51■□□□□ 0.87
HPS3-202ENST00000460120 CCDC12Q8WUD4 166 aaPredicted RBP20.51■□□□□ 0.87
HPS3-202ENST00000460120 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
HPS3-202ENST00000460120 DTHD1Q6ZMT9 781 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms