RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PCDHA5Q9Y5H7 936 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 ANKRD36CQ5JPF3 1778 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 CNTNAP5Q8WYK1 1306 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 GH2P01242 217 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 TXLNAP40222 546 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC178Q5BJE1 867 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 SMARCE1Q969G3 411 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 PSMD14O00487 310 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 TXKP42681 527 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 ICA1Q05084 483 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 UBE2SQ16763 222 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 STRIP1Q5VSL9 837 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 CCDC148Q8NFR7 591 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 SYMPKQ92797 1274 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 C6orf50Q9HD87 102 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 TMEM260Q9NX78 707 aa10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 R3HCC1Q9Y3T6 440 aaKnown RBP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUDCD3-203ENST00000460110 PP2D1A8MPX8 630 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 CYTH3O43739 400 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 UVSSAQ2YD98 709 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 TYW1BQ6NUM6 668 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 ZNF592Q92610 1267 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 STK36Q9NRP7 1315 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 A0A1W2PQ27 194 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 A0A1W2PQ64 194 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 A0A1W2PQD8 194 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 TTLL1O95922 423 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 PRAMEF18Q5VWM3 479 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 PPP1R9BQ96SB3 815 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 ARID3AQ99856 593 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 ZHX3Q9H4I2 956 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 MTMR4Q9NYA4 1195 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 MYH2Q9UKX2 1941 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 FAM205AQ6ZU69 1335 aa10.65□□□□□ -0.7
NUDCD3-203ENST00000460110 AP5Z1O43299 807 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 RRP9O43818 475 aaKnown RBP10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 EEF2P13639 858 aaKnown RBP10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 DACT2Q5SW24 774 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 FCHSD1Q86WN1 690 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 PIM2Q9P1W9 311 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.71
NUDCD3-203ENST00000460110 PDS5AQ29RF7 1337 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L10C9JJH3 530 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 MYO1BO43795 1136 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 KARSQ15046 597 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 PTPAQ15257 358 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 DTHD1Q6ZMT9 781 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 ENGASEQ8NFI3 743 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 MKRN1Q9UHC7 482 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 LRMPQ12912 555 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 GRM4Q14833 912 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 KRBA2Q6ZNG9 492 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 CDK5RAP3Q96JB5 506 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 PHF20Q9BVI0 1012 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 DALRD3Q5D0E6 543 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 C15orf52Q6ZUT6 534 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 REXO1Q8N1G1 1221 aaKnown RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 CCDC12Q8WUD4 166 aaPredicted RBP10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 GJA10Q969M2 543 aa10.64□□□□□ -0.71
NUDCD3-203ENST00000460110 DDX60Q8IY21 1712 aaKnown RBP10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 KLRG2A4D1S0 409 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TMEM232C9JQI7 657 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 PPP6R2O75170 966 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 GNA11P29992 359 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 STAT6P42226 847 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 MAP3K14Q99558 947 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 PCDHA4Q9UN74 947 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 IRS2Q9Y4H2 1338 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 YDJCA8MPS7 323 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 PTPREP23469 700 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TECP42680 631 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 FUT2Q10981 343 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 POSTNQ15063 836 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TMC6Q7Z403 805 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 MTA3Q9BTC8 594 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
NUDCD3-203ENST00000460110 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms