RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 APPP05067 770 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 RIOX2Q8IUF8 465 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 NEDD1Q8NHV4 660 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-228ENST00000459788 NAPBQ9H115 298 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 NRBP1Q9UHY1 535 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
HDLBP-228ENST00000459788 SMCHD1A6NHR9 2005 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 TTLL1O95922 423 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
HDLBP-228ENST00000459788 MFAP1P55081 439 aaKnown RBP11.91□□□□□ -0.5
HDLBP-228ENST00000459788 PPARAQ07869 468 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 CACNB2Q08289 660 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-228ENST00000459788 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDLBP-228ENST00000459788 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 DPF3Q92784 378 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 MTMR4Q9NYA4 1195 aa11.91□□□□□ -0.5
HDLBP-228ENST00000459788 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
HDLBP-228ENST00000459788 F5H6K3 240 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 SMIM22K7EJ46 135 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 VWA5AO00534 786 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 PEX10O60683 326 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 PLA2G6O60733 806 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 FGRP09769 529 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 FCER1AP12319 257 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 ERCC3P19447 782 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 OAZ1P54368 228 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 KLRC3Q07444 240 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 DPP9Q86TI2 863 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 SPICE1Q8N0Z3 855 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 PRPF38AQ8NAV1 312 aaKnown RBP11.9□□□□□ -0.5
HDLBP-228ENST00000459788 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 SLF1Q9BQI6 1058 aa11.9□□□□□ -0.5
HDLBP-228ENST00000459788 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 H0YGN5 161 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 ORC4O43929 436 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 TSPY3P0CV98 308 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 TSPY8P0CW00 308 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 ADORA2AP29274 412 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 STAT3P40763 770 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 NUCB1Q02818 461 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 TRIM32Q13049 653 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 HABP4Q5JVS0 413 aaKnown RBP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 LHX8Q68G74 356 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 CLEC10AQ8IUN9 316 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 MSL3Q8N5Y2 521 aaKnown RBP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 PAWRQ96IZ0 340 aaKnown RBP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
HDLBP-228ENST00000459788 ZNF214Q9UL59 606 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDLBP-228ENST00000459788 HIP1O00291 1037 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 EVI5O60447 810 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 NDUFB10O96000 172 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 COL6A1P12109 1028 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 NOVP48745 357 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-228ENST00000459788 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 CCL14Q16627 93 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 NCAPG2Q86XI2 1143 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
HDLBP-228ENST00000459788 TEX13BQ9BXU2 312 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 C11orf49Q9H6J7 331 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
HDLBP-228ENST00000459788 FOXP2O15409 715 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 ZBED4O75132 1171 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 CYBAP13498 195 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 TFAP4Q01664 338 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 PLS1Q14651 629 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 KCTD2Q14681 263 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 NPLOC4Q8TAT6 608 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 TCP11L1Q9NUJ3 509 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 FLRT1Q9NZU1 646 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 DDX20Q9UHI6 824 aaKnown RBP11.87□□□□□ -0.51
HDLBP-228ENST00000459788 RANBP2P49792 3224 aaKnown RBP11.87□□□□□ -0.51
HDLBP-228ENST00000459788 MCM3APO60318 1980 aa11.87□□□□□ -0.51
HDLBP-228ENST00000459788 SEPT4O43236 478 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 BMP3P12645 472 aa11.86□□□□□ -0.51
HDLBP-228ENST00000459788 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-228ENST00000459788 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms