RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 MAP3K10Q02779 954 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 FOXD4L6Q3SYB3 417 aaPredicted RBP12.01□□□□□ -0.49
USP39-210ENST00000459775 FOXD4L3Q6VB84 417 aaPredicted RBP12.01□□□□□ -0.49
USP39-210ENST00000459775 RINLQ6ZS11 566 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 GJB4Q9NTQ9 266 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 TCP11L1Q9NUJ3 509 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 TBC1D12O60347 775 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 CAP2P40123 477 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
USP39-210ENST00000459775 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 CATIPQ7Z7H3 387 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 FANCBQ8NB91 859 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 NSUN7Q8NE18 718 aaKnown RBP12.01□□□□□ -0.49
USP39-210ENST00000459775 CDCA5Q96FF9 252 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 ZNF408Q9H9D4 720 aa12.01□□□□□ -0.49
USP39-210ENST00000459775 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
USP39-210ENST00000459775 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
USP39-210ENST00000459775 GJB2P29033 226 aa12□□□□□ -0.49
USP39-210ENST00000459775 ICA1Q05084 483 aa12□□□□□ -0.49
USP39-210ENST00000459775 SPICE1Q8N0Z3 855 aa12□□□□□ -0.49
USP39-210ENST00000459775 CCDC17Q96LX7 622 aa12□□□□□ -0.49
USP39-210ENST00000459775 AIFM3Q96NN9 605 aa12□□□□□ -0.49
USP39-210ENST00000459775 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
USP39-210ENST00000459775 FRMPD2Q68DX3 1309 aaPredicted RBP12□□□□□ -0.49
USP39-210ENST00000459775 TTLL1O95922 423 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 RTN1Q16799 776 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 SLC35G1Q2M3R5 365 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 SYNE3Q6ZMZ3 975 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 TMEM179Q6ZVK1 233 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
USP39-210ENST00000459775 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 SAGE1Q9NXZ1 904 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 PLIN4Q96Q06 1357 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
USP39-210ENST00000459775 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
USP39-210ENST00000459775 DDIT3P35638 169 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 NOVP48745 357 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 NOGQ13253 232 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 NTRK3Q16288 839 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 CST9Q5W186 159 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 SAPCD2Q86UD0 394 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 ANKRD13AQ8IZ07 590 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 CHAMP1Q96JM3 812 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 KANSL2Q9H9L4 492 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
USP39-210ENST00000459775 OTUD7BQ6GQQ9 843 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
USP39-210ENST00000459775 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 UBA5Q9GZZ9 404 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 CPLX1O14810 134 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
USP39-210ENST00000459775 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.98□□□□□ -0.49
USP39-210ENST00000459775 KCTD1Q719H9 257 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 CDC37L1Q7L3B6 337 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 MAD2L2Q9UI95 211 aa11.98□□□□□ -0.49
USP39-210ENST00000459775 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
USP39-210ENST00000459775 PDHBP11177 359 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 SLC16A2P36021 539 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 GUCY1B3Q02153 619 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 GRM1Q13255 1194 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 NME8Q8N427 588 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 INTS4Q96HW7 963 aaKnown RBP11.97□□□□□ -0.49
USP39-210ENST00000459775 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
USP39-210ENST00000459775 F5H6K3 240 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.49
USP39-210ENST00000459775 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
USP39-210ENST00000459775 KLRC3Q07444 240 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 FUT2Q10981 343 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 VGLL4Q14135 290 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
USP39-210ENST00000459775 DCAF15Q66K64 600 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.96□□□□□ -0.493e-6■□□□□ 9.8
USP39-210ENST00000459775 SMARCC2Q8TAQ2 1214 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 TMEM51Q9NW97 253 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 ZDHHC9Q9Y397 364 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
USP39-210ENST00000459775 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
USP39-210ENST00000459775 TRIM75PA6NK02 468 aa11.96□□□□□ -0.5
USP39-210ENST00000459775 CYTH3O43739 400 aa11.96□□□□□ -0.5
USP39-210ENST00000459775 AOC2O75106 756 aa11.96□□□□□ -0.5
USP39-210ENST00000459775 DDAH1O94760 285 aa11.96□□□□□ -0.5
USP39-210ENST00000459775 NDUFB10O96000 172 aa11.96□□□□□ -0.5
USP39-210ENST00000459775 ASNSP08243 561 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms