RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TMEM232C9JQI7 657 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 MCM6Q14566 821 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 HOOK3Q86VS8 718 aa11.22□□□□□ -0.61
CSGALNACT1-203ENST00000454498 GAS7O60861 476 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 LMBR1Q8WVP7 490 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 DYDC1Q8WWB3 177 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 BCCIPQ9P287 314 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 VWDEQ8N2E2 1590 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 HARSP12081 509 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 NPR1P16066 1061 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 ADRA2BP18089 450 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 TRIML1Q8N9V2 468 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 SPATA31D1Q6ZQQ2 1576 aa11.21□□□□□ -0.61
CSGALNACT1-203ENST00000454498 IQSEC2Q5JU85 1478 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 TTLL1O95922 423 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 ALAS1P13196 640 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GBP2P32456 591 aaPredicted RBP11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 RESTQ13127 1097 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 TPH2Q8IWU9 490 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 SPICE1Q8N0Z3 855 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MYCT1Q8N699 235 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GOLGA1Q92805 767 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 COA1Q9GZY4 146 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 FANCLQ9NW38 375 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 SWAP70Q9UH65 585 aa11.21□□□□□ -0.62
CSGALNACT1-203ENST00000454498 PPP6R2O75170 966 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MMP1P03956 469 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 PRPHP41219 470 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CTR9Q6PD62 1173 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 TBC1D10CQ8IV04 446 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GJB4Q9NTQ9 266 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 RAD17O75943 681 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 BIRC3Q13489 604 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 TMTC1Q8IUR5 882 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 TTC14Q96N46 770 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 FNBP1Q96RU3 617 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 NUP58Q9BVL2 599 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CSRNP2Q9H175 543 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 RPAP1Q9BWH6 1393 aaPredicted RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GCNT3O95395 438 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 DCAF15Q66K64 600 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CYP26C1Q6V0L0 522 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 PPP1R9BQ96SB3 815 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MRPL44Q9H9J2 332 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 INCENPQ9NQS7 918 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CPDO75976 1380 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 LONP1P36776 959 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 NCBP1Q09161 790 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 IFT74Q96LB3 600 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CD209Q9NNX6 404 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MRPL11Q9Y3B7 192 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 IVNS1ABPQ9Y6Y0 642 aa11.2□□□□□ -0.62
CSGALNACT1-203ENST00000454498 KDM3AQ9Y4C1 1321 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 PDIA6Q15084 440 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 SMIM5Q71RC9 77 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 DGKHQ86XP1 1220 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 MARCH10Q8NA82 808 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 RFX7Q2KHR2 1363 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 EXOC3O60645 756 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 ACTN2P35609 894 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 FMNL3Q8IVF7 1028 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 FSD2A1L4K1 749 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 LRMPQ12912 555 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 NFIXQ14938 502 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 KIF2CQ99661 725 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 PLA2G12BQ9BX93 195 aa11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 DHX36Q9H2U1 1008 aaKnown RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 FAM207AQ9NSI2 230 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-203ENST00000454498 DDX25Q9UHL0 483 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms