RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 GSG1L2A8MUP6 293 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 MSCO60682 206 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 CNGA1P29973 690 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 PLS1Q14651 629 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 KBTBD3Q8NAB2 608 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 OSBP2Q969R2 916 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 MROH8Q9H579 483 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 PLXNA1Q9UIW2 1896 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
LINC01238-204ENST00000451070 COL6A3P12111 3177 aa11.87□□□□□ -0.51
LINC01238-204ENST00000451070 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
LINC01238-204ENST00000451070 ABRAQ8N0Z2 381 aa11.87□□□□□ -0.51
LINC01238-204ENST00000451070 SENP6Q9GZR1 1112 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-204ENST00000451070 ARPP21Q9UBL0 812 aaPredicted RBP11.87□□□□□ -0.51
LINC01238-204ENST00000451070 ROBO3Q96MS0 1386 aa11.87□□□□□ -0.51
LINC01238-204ENST00000451070 DNM1LO00429 736 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 RASA1P20936 1047 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 PRAMEF19Q5SWL8 479 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 ANO1Q5XXA6 986 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 REPS2Q8NFH8 660 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 APPBP2Q92624 585 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 EPB41L4AQ9HCS5 686 aaPredicted RBP11.86□□□□□ -0.51
LINC01238-204ENST00000451070 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 LTBP2Q14767 1821 aa11.86□□□□□ -0.51
LINC01238-204ENST00000451070 M0R2C6 588 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 VWA5AO00534 786 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 RNF113AO15541 343 aaKnown RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 SEPT4O43236 478 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 GPAA1O43292 621 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 SLC25A27O95847 323 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 FCER1AP12319 257 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 LRIT3Q3SXY7 679 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 RIOX2Q8IUF8 465 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 STK11IPQ8N1F8 1099 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
LINC01238-204ENST00000451070 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
LINC01238-204ENST00000451070 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 MINDY4BA8MYZ0 360 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 STAT3P40763 770 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
LINC01238-204ENST00000451070 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 SLC5A4Q9NY91 659 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 NYAP2Q9P242 653 aa11.84□□□□□ -0.51
LINC01238-204ENST00000451070 LAMA2P24043 3122 aaKnown RBP11.84□□□□□ -0.51
LINC01238-204ENST00000451070 F5H6K3 240 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 RAD21O60216 631 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
LINC01238-204ENST00000451070 NDUFB10O96000 172 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 PGK2P07205 417 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
LINC01238-204ENST00000451070 RTP1P59025 263 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 KLRC3Q07444 240 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 ZNF792Q3KQV3 632 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 FAM47AQ5JRC9 791 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 ARRDC4Q8NCT1 418 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 PI4K2BQ8TCG2 481 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
LINC01238-204ENST00000451070 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
LINC01238-204ENST00000451070 MMP19Q99542 508 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 SLF1Q9BQI6 1058 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 MKNK2Q9HBH9 465 aa11.83□□□□□ -0.52
LINC01238-204ENST00000451070 MCM3APO60318 1980 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 PRDM1O75626 825 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 TAL1P17542 331 aaPredicted RBP11.82□□□□□ -0.52
LINC01238-204ENST00000451070 GNAT2P19087 354 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 SNX17Q15036 470 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 LRRC41Q15345 812 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 SLC39A5Q6ZMH5 540 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 IFNL3Q8IZI9 196 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 TINF2Q9BSI4 451 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 NRBP1Q9UHY1 535 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
LINC01238-204ENST00000451070 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
LINC01238-204ENST00000451070 PATL2C9JE40 543 aaKnown RBP11.81□□□□□ -0.52
LINC01238-204ENST00000451070 KBTBD13C9JR72 458 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
LINC01238-204ENST00000451070 ADCYAP1R1P41586 468 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 TDO2P48775 406 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 KCTD2Q14681 263 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 Q7L0L9 218 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
LINC01238-204ENST00000451070 MKL1Q969V6 931 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms