RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ARHGAP39Q9C0H5 1083 aa16.92■□□□□ 0.3
COL3A1-203ENST00000450867 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
COL3A1-203ENST00000450867 ZNFX1Q9P2E3 1918 aaKnown RBP16.92■□□□□ 0.3
COL3A1-203ENST00000450867 PLA2G6O60733 806 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 FLOT1O75955 427 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 PSMC4P43686 418 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 PRMT2P55345 433 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 TRDNQ13061 729 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 SLFN13Q68D06 897 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
COL3A1-203ENST00000450867 GPRC5AQ8NFJ5 357 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 ZSCAN10Q96SZ4 725 aaPredicted RBP16.91■□□□□ 0.3
COL3A1-203ENST00000450867 PPP1R9AQ9ULJ8 1098 aa16.91■□□□□ 0.3
COL3A1-203ENST00000450867 SNHG28P0DPA3 235 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 BMP3P12645 472 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 FCGRTP55899 365 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 SEC23AQ15436 765 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
COL3A1-203ENST00000450867 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
COL3A1-203ENST00000450867 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 KCNB2Q92953 911 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
COL3A1-203ENST00000450867 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 FBXO28Q9NVF7 368 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
COL3A1-203ENST00000450867 REC8O95072 547 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 Q3C1V9 767 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 CYB5R4Q7L1T6 521 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 TNS4Q8IZW8 715 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
COL3A1-203ENST00000450867 REPS2Q8NFH8 660 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 PTPN22Q9Y2R2 807 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 TNKSO95271 1327 aa16.89■□□□□ 0.29
COL3A1-203ENST00000450867 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.29
COL3A1-203ENST00000450867 MYH6P13533 1939 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 VWA5AO00534 786 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 MAPK4P31152 587 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 SLC1A4P43007 532 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 ANTXR2P58335 489 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
COL3A1-203ENST00000450867 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 PAGR1Q9BTK6 254 aa16.88■□□□□ 0.29
COL3A1-203ENST00000450867 ATP2A1O14983 1001 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 RAD21O60216 631 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 PEX10O60683 326 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 FMNL1O95466 1100 aaPredicted RBP16.87■□□□□ 0.29
COL3A1-203ENST00000450867 FDX1P10109 184 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 MCCP23508 829 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 HOXD10P28358 340 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 CCNA1P78396 465 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 BTNL9Q6UXG8 535 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 FAM160B2Q86V87 743 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 UBAC1Q9BSL1 405 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 PORCNQ9H237 461 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 ZNF214Q9UL59 606 aaPredicted RBP16.87■□□□□ 0.29
COL3A1-203ENST00000450867 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
COL3A1-203ENST00000450867 PLXNA1Q9UIW2 1896 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
COL3A1-203ENST00000450867 PDHBP11177 359 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 HSPA4P34932 840 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 STAT2P52630 851 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 IRF5Q13568 498 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 RASGRP2Q7LDG7 609 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 CHURC1Q8WUH1 139 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 SLC38A10Q9HBR0 1119 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 GJD2Q9UKL4 321 aa16.86■□□□□ 0.29
COL3A1-203ENST00000450867 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 ZNF543Q08ER8 600 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 TMEM132BQ14DG7 1078 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 USP6NLQ92738 828 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 COA7Q96BR5 231 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
COL3A1-203ENST00000450867 KAT14Q9H8E8 782 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 CENPFP49454 3210 aa16.85■□□□□ 0.29
COL3A1-203ENST00000450867 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 MCM5P33992 734 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 OAZ1P54368 228 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 PRKCZQ05513 592 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 KRT32Q14532 448 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 SART3Q15020 963 aaKnown RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
COL3A1-203ENST00000450867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL3A1-203ENST00000450867 GPR142Q7Z601 462 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms