RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 SMC5Q8IY18 1101 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 ABRAQ8N0Z2 381 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 HELLSQ9NRZ9 838 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 PPP1R9AQ9ULJ8 1098 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 SYNPO2Q9UMS6 1093 aa20.66■□□□□ 0.9
CLTCL1-203ENST00000449918 IGKV6D-41A0A0C4DH26 115 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 F5H6K3 240 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 EVI5O60447 810 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 TSPY3P0CV98 308 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 TSPY8P0CW00 308 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 CCND3P30281 292 aaPredicted RBP20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 KLRC3Q07444 240 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 TMEM132BQ14DG7 1078 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 HABP4Q5JVS0 413 aaKnown RBP20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 NPLOC4Q8TAT6 608 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 NBPF3Q9H094 633 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 FBXO28Q9NVF7 368 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 MTMR4Q9NYA4 1195 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 FLRT1Q9NZU1 646 aa20.65■□□□□ 0.9
CLTCL1-203ENST00000449918 VWA5AO00534 786 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 TTLL1O95922 423 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 NDUFB10O96000 172 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 FCER1AP12319 257 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 CCDC129Q6ZRS4 1044 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 NEDD1Q8NHV4 660 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 DIS3LQ8TF46 1054 aaKnown RBP20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 MKL1Q969V6 931 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
CLTCL1-203ENST00000449918 COPB2P35606 906 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 STAT3P40763 770 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 TFAP4Q01664 338 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 PPP4R3BQ5MIZ7 849 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 OLFML2BQ68BL8 750 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 CHD1LQ86WJ1 897 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 SLF1Q9BQI6 1058 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 C11orf49Q9H6J7 331 aa20.63■□□□□ 0.89
CLTCL1-203ENST00000449918 TRIM6-TRIM34B2RNG4 842 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 MSCO60682 206 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 IGHDP01880 384 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 LHX8Q68G74 356 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 RIOX2Q8IUF8 465 aa20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 PRPF38AQ8NAV1 312 aaKnown RBP20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 NUP88Q99567 741 aaPredicted RBP20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 COLQQ9Y215 455 aaPredicted RBP20.62■□□□□ 0.89
CLTCL1-203ENST00000449918 COBLO75128 1261 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 CNGA1P29973 690 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 CYP2C19P33261 490 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 NUCB1Q02818 461 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 FAM47AQ5JRC9 791 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 MMP19Q99542 508 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 RLFQ13129 1914 aa20.61■□□□□ 0.89
CLTCL1-203ENST00000449918 PLIN4Q96Q06 1357 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 IGHA2P01877 340 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 MNX1P50219 401 aaPredicted RBP20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 KCTD2Q14681 263 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 ALX1Q15699 326 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 DDX20Q9UHI6 824 aaKnown RBP20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 FEM1BQ9UK73 627 aa20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 ZNF214Q9UL59 606 aaPredicted RBP20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
CLTCL1-203ENST00000449918 TSPY2A6NKD2 308 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 FOXP2O15409 715 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 ZBED4O75132 1171 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 VPS53Q5VIR6 699 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 LRRC47Q8N1G4 583 aaKnown RBP20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 REPS2Q8NFH8 660 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 FAM227BQ96M60 508 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 TEX13BQ9BXU2 312 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 ANAPC4Q9UJX5 808 aa20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 SUPT16HQ9Y5B9 1047 aaKnown RBP20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
CLTCL1-203ENST00000449918 A0A0G2JMZ2 1700 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 CTDSPL2Q05D32 466 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 SLFN13Q68D06 897 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 CHRDL2Q6WN34 429 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 PLEKHM2Q8IWE5 1019 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 OSBPL3Q9H4L5 887 aa20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLTCL1-203ENST00000449918 A0A0D9SFI3 127 aa20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 CYBAP13498 195 aa20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 MFAP1P55081 439 aaKnown RBP20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 DIS3Q9Y2L1 958 aaKnown RBP20.57■□□□□ 0.88
CLTCL1-203ENST00000449918 ATP2A1O14983 1001 aa20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 RANBP6O60518 1105 aaKnown RBP20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 FGAP02671 866 aa20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 BMP3P12645 472 aa20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 NMIQ13287 307 aaPredicted RBP20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 SNRNP48Q6IEG0 339 aaKnown RBP20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 TRPV1Q8NER1 839 aa20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
CLTCL1-203ENST00000449918 ZNF236Q9UL36 1845 aa20.55■□□□□ 0.88
CLTCL1-203ENST00000449918 ORC4O43929 436 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms