RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 RTP1P59025 263 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 MDM2Q00987 491 aaPredicted RBP13.95□□□□□ -0.18
COPS7B-213ENST00000449174 TMEM132BQ14DG7 1078 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 SNX17Q15036 470 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 C1orf53Q5VUE5 145 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 RIOX2Q8IUF8 465 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 MMP19Q99542 508 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 PPP1R9AQ9ULJ8 1098 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 STXBP5LQ9Y2K9 1186 aa13.95□□□□□ -0.18
COPS7B-213ENST00000449174 VWA5AO00534 786 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 STAT3P40763 770 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-213ENST00000449174 KCTD2Q14681 263 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 SLFNL1Q499Z3 407 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 GJC2Q5T442 439 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-213ENST00000449174 FAM109BQ6ICB4 259 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-213ENST00000449174 SLC39A5Q6ZMH5 540 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 CLEC10AQ8IUN9 316 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
COPS7B-213ENST00000449174 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
COPS7B-213ENST00000449174 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
COPS7B-213ENST00000449174 COL11A1P12107 1806 aaPredicted RBP13.93□□□□□ -0.18
COPS7B-213ENST00000449174 CYP2D7A0A087X1C5 515 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
COPS7B-213ENST00000449174 RARBP10826 455 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 GNAT2P19087 354 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 LRRFIP1Q32MZ4 808 aaKnown RBP13.93□□□□□ -0.18
COPS7B-213ENST00000449174 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
COPS7B-213ENST00000449174 KBTBD3Q8NAB2 608 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 STRBPQ96SI9 672 aaKnown RBP13.93□□□□□ -0.18
COPS7B-213ENST00000449174 MTMR10Q9NXD2 777 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 SYNPO2Q9UMS6 1093 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 LAMA3Q16787 3333 aa13.93□□□□□ -0.18
COPS7B-213ENST00000449174 LRRC41Q15345 812 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
COPS7B-213ENST00000449174 APPBP2Q92624 585 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 TINF2Q9BSI4 451 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 MKNK2Q9HBH9 465 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 ZNF214Q9UL59 606 aaPredicted RBP13.92□□□□□ -0.18
COPS7B-213ENST00000449174 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
COPS7B-213ENST00000449174 RAD21O60216 631 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 CHGBP05060 677 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 AKR1A1P14550 325 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 ZNF792Q3KQV3 632 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 Q7L0L9 218 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 RNF180Q86T96 592 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 REPS2Q8NFH8 660 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
COPS7B-213ENST00000449174 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 DCTPP1Q9H773 170 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 PHF24Q9UPV7 400 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 CNPY2Q9Y2B0 182 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 PLXNA1Q9UIW2 1896 aa13.91□□□□□ -0.18
COPS7B-213ENST00000449174 ZNFX1Q9P2E3 1918 aaKnown RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 F5H6K3 240 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 POTEB2H3BUK9 544 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 SMIM22K7EJ46 135 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 DLL1O00548 723 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 RNF113AO15541 343 aaKnown RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 RASA1P20936 1047 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 ADCYAP1R1P41586 468 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 KLRC3Q07444 240 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 TRIM60Q495X7 471 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 FAM47AQ5JRC9 791 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 PRAMEF19Q5SWL8 479 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 ANO1Q5XXA6 986 aa13.9□□□□□ -0.18
COPS7B-213ENST00000449174 PRPF38AQ8NAV1 312 aaKnown RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
COPS7B-213ENST00000449174 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.19
COPS7B-213ENST00000449174 MINDY4BA8MYZ0 360 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 PGK2P07205 417 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 TDO2P48775 406 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 SNRNP48Q6IEG0 339 aaKnown RBP13.89□□□□□ -0.19
COPS7B-213ENST00000449174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
COPS7B-213ENST00000449174 ZNF444Q8N0Y2 327 aaPredicted RBP13.89□□□□□ -0.19
COPS7B-213ENST00000449174 MKL1Q969V6 931 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 TSEN34Q9BSV6 310 aaKnown RBP13.89□□□□□ -0.19
COPS7B-213ENST00000449174 NACAP1Q9BZK3 213 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 TACC3Q9Y6A5 838 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
COPS7B-213ENST00000449174 IGKV6D-41A0A0C4DH26 115 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 GPAA1O43292 621 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 ZBED4O75132 1171 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 NDUFB10O96000 172 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-213ENST00000449174 FDX1P10109 184 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 OAZ1P54368 228 aa13.88□□□□□ -0.19
COPS7B-213ENST00000449174 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms