RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 CLIP2Q9UDT6 1046 aa23.45■■□□□ 1.34
VCP-203ENST00000448530 MYH4Q9Y623 1939 aa23.45■■□□□ 1.34
VCP-203ENST00000448530 PPARAQ07869 468 aa23.44■■□□□ 1.34
VCP-203ENST00000448530 FBXO28Q9NVF7 368 aa23.44■■□□□ 1.34
VCP-203ENST00000448530 COL11A1P12107 1806 aaPredicted RBP23.43■■□□□ 1.34
VCP-203ENST00000448530 F5H6K3 240 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 EVI5O60447 810 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 SLC25A27O95847 323 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 ADORA2AP29274 412 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 KLRC3Q07444 240 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 CCDC129Q6ZRS4 1044 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 SMC5Q8IY18 1101 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 EXOC6Q8TAG9 804 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 NBPF3Q9H094 633 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 OGDHLQ9ULD0 1010 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 PPP1R9AQ9ULJ8 1098 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 ZNF236Q9UL36 1845 aa23.43■■□□□ 1.34
VCP-203ENST00000448530 TRIM6-TRIM34B2RNG4 842 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 CCND3P30281 292 aaPredicted RBP23.42■■□□□ 1.34
VCP-203ENST00000448530 TMEM132BQ14DG7 1078 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 HABP4Q5JVS0 413 aaKnown RBP23.42■■□□□ 1.34
VCP-203ENST00000448530 NPLOC4Q8TAT6 608 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 DIS3LQ8TF46 1054 aaKnown RBP23.42■■□□□ 1.34
VCP-203ENST00000448530 CEP95Q96GE4 821 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 HELLSQ9NRZ9 838 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 FLRT1Q9NZU1 646 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 ADAMTS5Q9UNA0 930 aa23.42■■□□□ 1.34
VCP-203ENST00000448530 IGKV6D-41A0A0C4DH26 115 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 VWA5AO00534 786 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 TTLL1O95922 423 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 NDUFB10O96000 172 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 FCER1AP12319 257 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 CNGA1P29973 690 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 TICAM2Q86XR7 235 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 ABRAQ8N0Z2 381 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 NUP88Q99567 741 aaPredicted RBP23.41■■□□□ 1.34
VCP-203ENST00000448530 SLF1Q9BQI6 1058 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 MTMR4Q9NYA4 1195 aa23.41■■□□□ 1.34
VCP-203ENST00000448530 COPB2P35606 906 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 TFAP4Q01664 338 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 CHD1LQ86WJ1 897 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 NEDD1Q8NHV4 660 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 RILPL2Q969X0 211 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 C11orf49Q9H6J7 331 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 SYNPO2Q9UMS6 1093 aa23.4■■□□□ 1.34
VCP-203ENST00000448530 CTDP1Q9Y5B0 961 aaPredicted RBP23.4■■□□□ 1.34
VCP-203ENST00000448530 CYP2C19P33261 490 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 STAT3P40763 770 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 MCMDC2Q4G0Z9 681 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 FAM47AQ5JRC9 791 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 PPP4R3BQ5MIZ7 849 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 OLFML2BQ68BL8 750 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 RIOX2Q8IUF8 465 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 MKL1Q969V6 931 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 COLQQ9Y215 455 aaPredicted RBP23.39■■□□□ 1.33
VCP-203ENST00000448530 PLIN4Q96Q06 1357 aa23.39■■□□□ 1.33
VCP-203ENST00000448530 ZNFX1Q9P2E3 1918 aaKnown RBP23.38■■□□□ 1.33
VCP-203ENST00000448530 MSCO60682 206 aa23.38■■□□□ 1.33
VCP-203ENST00000448530 IGHDP01880 384 aa23.38■■□□□ 1.33
VCP-203ENST00000448530 LRRC47Q8N1G4 583 aaKnown RBP23.38■■□□□ 1.33
VCP-203ENST00000448530 PRPF38AQ8NAV1 312 aaKnown RBP23.38■■□□□ 1.33
VCP-203ENST00000448530 MMP19Q99542 508 aa23.38■■□□□ 1.33
VCP-203ENST00000448530 ISY1Q9ULR0 285 aaKnown RBP23.38■■□□□ 1.33
VCP-203ENST00000448530 TSPY2A6NKD2 308 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 COBLO75128 1261 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 NUCB1Q02818 461 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 CTDSPL2Q05D32 466 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 KCTD2Q14681 263 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 LHX8Q68G74 356 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 GMCL1P1Q8NEA9 526 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 FAM227BQ96M60 508 aa23.37■■□□□ 1.33
VCP-203ENST00000448530 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
VCP-203ENST00000448530 ZBED4O75132 1171 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 VPS53Q5VIR6 699 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 CHRDL2Q6WN34 429 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 TEX13BQ9BXU2 312 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 DDX20Q9UHI6 824 aaKnown RBP23.36■■□□□ 1.33
VCP-203ENST00000448530 FEM1BQ9UK73 627 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 ZNF214Q9UL59 606 aaPredicted RBP23.36■■□□□ 1.33
VCP-203ENST00000448530 FRMPD3Q5JV73 1810 aa23.36■■□□□ 1.33
VCP-203ENST00000448530 A0A0D9SFI3 127 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 FOXP2O15409 715 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 MNX1P50219 401 aaPredicted RBP23.35■■□□□ 1.33
VCP-203ENST00000448530 NMIQ13287 307 aaPredicted RBP23.35■■□□□ 1.33
VCP-203ENST00000448530 ALX1Q15699 326 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 SLFN13Q68D06 897 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 KIFC2Q96AC6 838 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 ANAPC4Q9UJX5 808 aa23.35■■□□□ 1.33
VCP-203ENST00000448530 ALPK3Q96L96 1907 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 RANBP6O60518 1105 aaKnown RBP23.34■■□□□ 1.33
VCP-203ENST00000448530 BMP3P12645 472 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 SLC4A3P48751 1232 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 MFAP1P55081 439 aaKnown RBP23.34■■□□□ 1.33
VCP-203ENST00000448530 SNRNP48Q6IEG0 339 aaKnown RBP23.34■■□□□ 1.33
VCP-203ENST00000448530 PLEKHM2Q8IWE5 1019 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 C7orf61Q8IZ16 206 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 REPS2Q8NFH8 660 aa23.34■■□□□ 1.33
VCP-203ENST00000448530 TOMM22Q9NS69 142 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms