RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ZMYND8Q9ULU4 1186 aaPredicted RBP21.78■■□□□ 1.08
COL9A1-205ENST00000447041 ERC2O15083 957 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 STRNO43815 780 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 COBLO75128 1261 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 GNAT2P19087 354 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 FAM83BQ5T0W9 1011 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 STAP2Q9UGK3 403 aa21.77■■□□□ 1.08
COL9A1-205ENST00000447041 DDX20Q9UHI6 824 aaKnown RBP21.77■■□□□ 1.08
COL9A1-205ENST00000447041 MYH4Q9Y623 1939 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 PRDM1O75626 825 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 APPP05067 770 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 CYBAP13498 195 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 MX1P20591 662 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 CNGA1P29973 690 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 FSD1Q9BTV5 496 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 MROH8Q9H579 483 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 PPP1R9AQ9ULJ8 1098 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 ADAMTS5Q9UNA0 930 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 SALL3Q9BXA9 1300 aa21.76■■□□□ 1.07
COL9A1-205ENST00000447041 SYN1P17600 705 aa21.75■■□□□ 1.07
COL9A1-205ENST00000447041 OLFML2BQ68BL8 750 aa21.75■■□□□ 1.07
COL9A1-205ENST00000447041 IFNL3Q8IZI9 196 aa21.75■■□□□ 1.07
COL9A1-205ENST00000447041 NUP88Q99567 741 aaPredicted RBP21.75■■□□□ 1.07
COL9A1-205ENST00000447041 PATL2C9JE40 543 aaKnown RBP21.74■■□□□ 1.07
COL9A1-205ENST00000447041 LRRFIP1Q32MZ4 808 aaKnown RBP21.74■■□□□ 1.07
COL9A1-205ENST00000447041 NYAP2Q9P242 653 aa21.74■■□□□ 1.07
COL9A1-205ENST00000447041 LAMA3Q16787 3333 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 IGKV6D-41A0A0C4DH26 115 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 VWA5AO00534 786 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 SLC25A27O95847 323 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 LRRC26Q2I0M4 334 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 ZMYM1Q5SVZ6 1142 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 ABRAQ8N0Z2 381 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 REPS2Q8NFH8 660 aa21.73■■□□□ 1.07
COL9A1-205ENST00000447041 ZNF214Q9UL59 606 aaPredicted RBP21.73■■□□□ 1.07
COL9A1-205ENST00000447041 ZNFX1Q9P2E3 1918 aaKnown RBP21.72■■□□□ 1.07
COL9A1-205ENST00000447041 MSCO60682 206 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 NDUFB10O96000 172 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 FCER1AP12319 257 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 RIOX2Q8IUF8 465 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 MAML3Q96JK9 1138 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 GDF15Q99988 308 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 CLIP2Q9UDT6 1046 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 PLXNA1Q9UIW2 1896 aa21.72■■□□□ 1.07
COL9A1-205ENST00000447041 A0A1W2PPC1 479 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 F5H6K3 240 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 KLRC3Q07444 240 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 ANKRD45Q5TZF3 282 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 ANO1Q5XXA6 986 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 CCDC129Q6ZRS4 1044 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 ZNF444Q8N0Y2 327 aaPredicted RBP21.71■■□□□ 1.07
COL9A1-205ENST00000447041 CEP95Q96GE4 821 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 MMP19Q99542 508 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 SLF1Q9BQI6 1058 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 SLC5A4Q9NY91 659 aa21.71■■□□□ 1.07
COL9A1-205ENST00000447041 PGK2P07205 417 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 STAT3P40763 770 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 PRAMEF19Q5SWL8 479 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
COL9A1-205ENST00000447041 NACAP1Q9BZK3 213 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 SENP6Q9GZR1 1112 aaPredicted RBP21.7■■□□□ 1.06
COL9A1-205ENST00000447041 NAPBQ9H115 298 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 ZNF287Q9HBT7 754 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 PLIN4Q96Q06 1357 aa21.7■■□□□ 1.06
COL9A1-205ENST00000447041 SOX1O00570 391 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-205ENST00000447041 FOXP2O15409 715 aa21.69■■□□□ 1.06
COL9A1-205ENST00000447041 MAGEA10P43363 369 aaPredicted RBP21.69■■□□□ 1.06
COL9A1-205ENST00000447041 LRRC47Q8N1G4 583 aaKnown RBP21.69■■□□□ 1.06
COL9A1-205ENST00000447041 MTMR4Q9NYA4 1195 aa21.69■■□□□ 1.06
COL9A1-205ENST00000447041 DNM1LO00429 736 aa21.68■■□□□ 1.06
COL9A1-205ENST00000447041 SEPT4O43236 478 aa21.68■■□□□ 1.06
COL9A1-205ENST00000447041 BMP8BP34820 402 aa21.68■■□□□ 1.06
COL9A1-205ENST00000447041 PPARAQ07869 468 aa21.68■■□□□ 1.06
COL9A1-205ENST00000447041 FAM47AQ5JRC9 791 aa21.68■■□□□ 1.06
COL9A1-205ENST00000447041 GJC2Q5T442 439 aaPredicted RBP21.68■■□□□ 1.06
COL9A1-205ENST00000447041 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
COL9A1-205ENST00000447041 TSPY3P0CV98 308 aa21.67■■□□□ 1.06
COL9A1-205ENST00000447041 TSPY8P0CW00 308 aa21.67■■□□□ 1.06
COL9A1-205ENST00000447041 ATN1P54259 1190 aaPredicted RBP21.67■■□□□ 1.06
COL9A1-205ENST00000447041 PDE4BQ07343 736 aa21.67■■□□□ 1.06
COL9A1-205ENST00000447041 HDAC1Q13547 482 aaPredicted RBP21.67■■□□□ 1.06
COL9A1-205ENST00000447041 KCTD2Q14681 263 aa21.67■■□□□ 1.06
COL9A1-205ENST00000447041 SNRNP48Q6IEG0 339 aaKnown RBP21.67■■□□□ 1.06
COL9A1-205ENST00000447041 DNAH12Q6ZR08 3092 aa21.67■■□□□ 1.06
COL9A1-205ENST00000447041 TTLL1O95922 423 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 COPB2P35606 906 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 PDE1AP54750 535 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 ZNF792Q3KQV3 632 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 NEDD1Q8NHV4 660 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 MKL1Q969V6 931 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 LRCH3Q96II8 777 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 TEX13BQ9BXU2 312 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 RIPK3Q9Y572 518 aa21.66■■□□□ 1.06
COL9A1-205ENST00000447041 SLC3A2P08195 630 aaKnown RBP21.65■■□□□ 1.06
COL9A1-205ENST00000447041 TFAP4Q01664 338 aa21.65■■□□□ 1.06
COL9A1-205ENST00000447041 VPS53Q5VIR6 699 aa21.65■■□□□ 1.06
COL9A1-205ENST00000447041 PRPF38AQ8NAV1 312 aaKnown RBP21.65■■□□□ 1.06
COL9A1-205ENST00000447041 GMCL1P1Q8NEA9 526 aa21.65■■□□□ 1.06
COL9A1-205ENST00000447041 KIFC2Q96AC6 838 aa21.65■■□□□ 1.06
COL9A1-205ENST00000447041 EVI5LQ96CN4 794 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms