RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 A0A1W2PQC6 194 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 PRPHP41219 470 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 CCNHP51946 323 aaPredicted RBP15.32■□□□□ 0.04
LINC02048-201ENST00000440556 RIPK1Q13546 671 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 CWF19L2Q2TBE0 894 aaKnown RBP15.32■□□□□ 0.04
LINC02048-201ENST00000440556 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 RALYLQ86SE5 291 aaKnown RBP15.32■□□□□ 0.04
LINC02048-201ENST00000440556 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 ITFG2Q969R8 447 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 ATP6V1G3Q96LB4 118 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 SCLT1Q96NL6 688 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 EBF2Q9HAK2 575 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 BCL9LQ86UU0 1499 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
LINC02048-201ENST00000440556 ZNF335Q9H4Z2 1342 aaPredicted RBP15.32■□□□□ 0.04
LINC02048-201ENST00000440556 SRGAP2O75044 1071 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 PDHBP11177 359 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 IDEP14735 1019 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 HERVK_113P62684 666 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 ATP2B2Q01814 1243 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 C2orf54Q08AI8 447 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 KRT31Q15323 416 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 CDCA2Q69YH5 1023 aaPredicted RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 STK11IPQ8N1F8 1099 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TRIM58Q8NG06 486 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 CYFIP2Q96F07 1278 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 RNF14Q9UBS8 474 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 SNX12Q9UMY4 172 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 GMNCA6NCL1 334 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 ATP1A2P50993 1020 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 HDLBPQ00341 1268 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 NEXNQ0ZGT2 675 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TFCP2Q12800 502 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 PAK2Q13177 524 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 LRIG3Q6UXM1 1119 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 NOSTRINQ8IVI9 506 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 RRP36Q96EU6 259 aaKnown RBP15.31■□□□□ 0.04
LINC02048-201ENST00000440556 JADE2Q9NQC1 790 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 RWDD2AQ9UIY3 292 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 TBC1D2BQ9UPU7 963 aa15.31■□□□□ 0.04
LINC02048-201ENST00000440556 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 PPP1R3GB7ZBB8 358 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 E7EVH7 732 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 TACC1O75410 805 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 SNUPNO95149 360 aaKnown RBP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 INHBEP58166 350 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 CREG2Q8IUH2 290 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 TSEN2Q8NCE0 465 aaKnown RBP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 RASSF8Q8NHQ8 419 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 WHAMMQ8TF30 809 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 LRRC1Q9BTT6 524 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 NUP58Q9BVL2 599 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 CPSF2Q9P2I0 782 aaKnown RBP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 PIK3C2AO00443 1686 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 MAST3O60307 1309 aa15.3■□□□□ 0.04
LINC02048-201ENST00000440556 PHRF1Q9P1Y6 1649 aaKnown RBP15.3■□□□□ 0.04
LINC02048-201ENST00000440556 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 METAP2P50579 478 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 GUCY1A3Q02108 690 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 MEA1Q16626 185 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 APLFQ8IW19 511 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 EIF1ADQ8N9N8 165 aaKnown RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 SPATA4Q8NEY3 305 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 CUL5Q93034 780 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 CHP1Q99653 195 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 GJB4Q9NTQ9 266 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 RGPD8O14715 1765 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 GSTA1P08263 222 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 IARSP41252 1262 aaKnown RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 SCTRP47872 440 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 CDK17Q00537 523 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 KIF5AQ12840 1032 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 ITGB3BPQ13352 177 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
LINC02048-201ENST00000440556 TCP11X2Q5H9J9 407 aa15.29■□□□□ 0.04
LINC02048-201ENST00000440556 CACNA2D3Q8IZS8 1091 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms