RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 MSCO60682 206 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 SLC25A27O95847 323 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 SLC3A2P08195 630 aaKnown RBP22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 MNX1P50219 401 aaPredicted RBP22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 FAM83BQ5T0W9 1011 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 LHX8Q68G74 356 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 IFNL3Q8IZI9 196 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 NAPBQ9H115 298 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 FBXO28Q9NVF7 368 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 DDX20Q9UHI6 824 aaKnown RBP22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 GREB1LQ9C091 1923 aaPredicted RBP22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 COL11A1P12107 1806 aaPredicted RBP22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 FRMPD3Q5JV73 1810 aa22.01■■□□□ 1.11
AC004540.1-201ENST00000439120 FCER1AP12319 257 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 TMEM132BQ14DG7 1078 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 OLFML2BQ68BL8 750 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 ABRAQ8N0Z2 381 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 SEC62Q99442 399 aaKnown RBP22■■□□□ 1.11
AC004540.1-201ENST00000439120 GNL3Q9BVP2 549 aaKnown RBP eCLIP22■■□□□ 1.11
AC004540.1-201ENST00000439120 NYAP2Q9P242 653 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 PPP1R9AQ9ULJ8 1098 aa22■■□□□ 1.11
AC004540.1-201ENST00000439120 PRDM1O75626 825 aa21.99■■□□□ 1.11
AC004540.1-201ENST00000439120 PDE4BQ07343 736 aa21.99■■□□□ 1.11
AC004540.1-201ENST00000439120 ZMYM1Q5SVZ6 1142 aa21.99■■□□□ 1.11
AC004540.1-201ENST00000439120 CLIP2Q9UDT6 1046 aa21.99■■□□□ 1.11
AC004540.1-201ENST00000439120 MMP19Q99542 508 aa21.98■■□□□ 1.11
AC004540.1-201ENST00000439120 ZMYND8Q9ULU4 1186 aaPredicted RBP21.98■■□□□ 1.11
AC004540.1-201ENST00000439120 CTDP1Q9Y5B0 961 aaPredicted RBP21.98■■□□□ 1.11
AC004540.1-201ENST00000439120 PFASO15067 1338 aa21.98■■□□□ 1.11
AC004540.1-201ENST00000439120 MYH4Q9Y623 1939 aa21.98■■□□□ 1.11
AC004540.1-201ENST00000439120 F5H6K3 240 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 VWA5AO00534 786 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 COBLO75128 1261 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 TSPY3P0CV98 308 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 TSPY8P0CW00 308 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 COPB2P35606 906 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 STAT3P40763 770 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 KLRC3Q07444 240 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 RIOX2Q8IUF8 465 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 NUP88Q99567 741 aaPredicted RBP21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 SLF1Q9BQI6 1058 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 STAP2Q9UGK3 403 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 ADAMTS5Q9UNA0 930 aa21.97■■□□□ 1.11
AC004540.1-201ENST00000439120 NDUFB10O96000 172 aa21.96■■□□□ 1.11
AC004540.1-201ENST00000439120 CYBAP13498 195 aa21.96■■□□□ 1.11
AC004540.1-201ENST00000439120 HDAC1Q13547 482 aaPredicted RBP21.96■■□□□ 1.11
AC004540.1-201ENST00000439120 KCTD2Q14681 263 aa21.96■■□□□ 1.11
AC004540.1-201ENST00000439120 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
AC004540.1-201ENST00000439120 TTLL1O95922 423 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 COL6A1P12109 1028 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 SYN1P17600 705 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 PPARAQ07869 468 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 TRPV1Q8NER1 839 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 CEP95Q96GE4 821 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 MAML3Q96JK9 1138 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 PRO3102Q9H379 93 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 ISY1Q9ULR0 285 aaKnown RBP21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 TRIOBPQ9H2D6 2365 aa21.95■■□□□ 1.1
AC004540.1-201ENST00000439120 IGKV6D-41A0A0C4DH26 115 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 A0A1W2PPC1 479 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 AAMPQ13685 434 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 PRPF38AQ8NAV1 312 aaKnown RBP21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 ARRDC4Q8NCT1 418 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 SENP6Q9GZR1 1112 aaPredicted RBP21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 MTMR4Q9NYA4 1195 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 SALL3Q9BXA9 1300 aa21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 ZNFX1Q9P2E3 1918 aaKnown RBP21.94■■□□□ 1.1
AC004540.1-201ENST00000439120 DNM1LO00429 736 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 SEPT4O43236 478 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 ZBED4O75132 1171 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 MYCNP04198 464 aaPredicted RBP21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 PGK2P07205 417 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 SLC4A3P48751 1232 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 SNRNP48Q6IEG0 339 aaKnown RBP21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 CCDC129Q6ZRS4 1044 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 LRRC47Q8N1G4 583 aaKnown RBP21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 TEX13BQ9BXU2 312 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 ZNF214Q9UL59 606 aaPredicted RBP21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 SYNPO2Q9UMS6 1093 aa21.93■■□□□ 1.1
AC004540.1-201ENST00000439120 PLIN4Q96Q06 1357 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 KBTBD13C9JR72 458 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 IGHA2P01877 340 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 PDE1AP54750 535 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 TFAP4Q01664 338 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 LRRC26Q2I0M4 334 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 FAM47AQ5JRC9 791 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 NEDD1Q8NHV4 660 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 MKL1Q969V6 931 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 KIFC2Q96AC6 838 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 PLXNA1Q9UIW2 1896 aa21.92■■□□□ 1.1
AC004540.1-201ENST00000439120 PRAMEF19Q5SWL8 479 aa21.91■■□□□ 1.1
AC004540.1-201ENST00000439120 ANO1Q5XXA6 986 aa21.91■■□□□ 1.1
AC004540.1-201ENST00000439120 GMCL1P1Q8NEA9 526 aa21.91■■□□□ 1.1
AC004540.1-201ENST00000439120 REPS2Q8NFH8 660 aa21.91■■□□□ 1.1
AC004540.1-201ENST00000439120 FEM1BQ9UK73 627 aa21.91■■□□□ 1.1
AC004540.1-201ENST00000439120 TSPY2A6NKD2 308 aa21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 GJC2Q5T442 439 aaPredicted RBP21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 SLFN13Q68D06 897 aa21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 CPXCR1Q8N123 301 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms