RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 LACTBP83111 547 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-209ENST00000438120 GADL1Q6ZQY3 521 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 TBC1D8O95759 1140 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 PSMD6Q15008 389 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 LONRF2Q1L5Z9 754 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 XKR9Q5GH70 373 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 ADALQ6DHV7 355 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 SND1Q7KZF4 910 aaKnown RBP eCLIP18.98■□□□□ 0.631e-16■■■□□ 18.3
PTPRF-209ENST00000438120 BTBD18B2RXH4 712 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 MAN1A1P33908 653 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-209ENST00000438120 PHKA1P46020 1223 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 SUGCTQ9HAC7 445 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 XRCC5P13010 732 aaKnown RBP18.98■□□□□ 0.63
PTPRF-209ENST00000438120 KRT15P19012 456 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 CFAP221Q4G0U5 840 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-209ENST00000438120 ZNF274Q96GC6 653 aaPredicted RBP18.98■□□□□ 0.63
PTPRF-209ENST00000438120 CARD10Q9BWT7 1032 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 VPS37BQ9H9H4 285 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 PTPRTO14522 1441 aa18.98■□□□□ 0.63
PTPRF-209ENST00000438120 GOLGA6BA6NDN3 693 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 BRD1O95696 1058 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 MORC3Q14149 939 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 MYOCDQ8IZQ8 938 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 CCDC89Q8N998 374 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 ATP10AO60312 1499 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 ABCC4O15439 1325 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 BUB1O43683 1085 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 PKP1Q13835 747 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 GKAP1Q5VSY0 366 aaPredicted RBP18.97■□□□□ 0.63
PTPRF-209ENST00000438120 HHATQ5VTY9 493 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 MGARPQ8TDB4 240 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 K7ENM7 598 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 ZNF445P59923 1031 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 IFRD2Q12894 506 aaPredicted RBP18.97■□□□□ 0.63
PTPRF-209ENST00000438120 SCYL2Q6P3W7 929 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 SLC39A2Q9NP94 309 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 CCDC125Q86Z20 511 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 SYCE1Q8N0S2 351 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 TM6SF1Q9BZW5 370 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 KIAA1468Q9P260 1216 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 KCNQ4P56696 695 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 PANK4Q9NVE7 773 aa18.97■□□□□ 0.63
PTPRF-209ENST00000438120 DDX25Q9UHL0 483 aaKnown RBP18.97■□□□□ 0.63
PTPRF-209ENST00000438120 ZMYM6O95789 1325 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 KSR1Q8IVT5 923 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 TLR7Q9NYK1 1049 aaKnown RBP18.96■□□□□ 0.63
PTPRF-209ENST00000438120 ABL1P00519 1130 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 POLR2MP0CAP2 368 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 ICA1Q05084 483 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 MMS19Q96T76 1030 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 TMEM232C9JQI7 657 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 LIG4P49917 911 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 GUCY2FP51841 1108 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 CYP4A11Q02928 519 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 TAB3Q8N5C8 712 aaPredicted RBP18.96■□□□□ 0.63
PTPRF-209ENST00000438120 MED10Q9BTT4 135 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 UBXN2AP68543 259 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 DLATP10515 647 aaKnown RBP18.96■□□□□ 0.63
PTPRF-209ENST00000438120 CNGA1P29973 690 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 POLA2Q14181 598 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 ADAT2Q7Z6V5 191 aaKnown RBP18.96■□□□□ 0.63
PTPRF-209ENST00000438120 SESTD1Q86VW0 696 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 NCAPG2Q86XI2 1143 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 ASAP1Q9ULH1 1129 aa18.96■□□□□ 0.63
PTPRF-209ENST00000438120 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 IFNB1P01574 187 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 GNPTABQ3T906 1256 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 CLIC4Q9Y696 253 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 SCG2P13521 617 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 IGBP1P78318 339 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 RIOK1Q9BRS2 568 aaKnown RBP18.95■□□□□ 0.62
PTPRF-209ENST00000438120 AFG3L2Q9Y4W6 797 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 NPC1L1Q9UHC9 1359 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 ZWINTO95229 277 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 ATP2B4P23634 1241 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 NEDD9Q14511 834 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 CEP128Q6ZU80 1094 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 ARHGAP27Q6ZUM4 889 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 FBXO11Q86XK2 927 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 FAM184BQ9ULE4 1060 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 NEK8Q86SG6 692 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 SDCCAG8Q86SQ7 713 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-209ENST00000438120 STAT1P42224 750 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 TBC1D10BQ4KMP7 808 aaPredicted RBP18.95■□□□□ 0.62
PTPRF-209ENST00000438120 ANKRD35Q8N283 1001 aa18.95■□□□□ 0.62
PTPRF-209ENST00000438120 CLRN2A0PK11 232 aa18.94■□□□□ 0.62
PTPRF-209ENST00000438120 PFKFB2O60825 505 aa18.94■□□□□ 0.62
PTPRF-209ENST00000438120 BAG6P46379 1132 aa18.94■□□□□ 0.62
PTPRF-209ENST00000438120 VPS41P49754 854 aa18.94■□□□□ 0.62
PTPRF-209ENST00000438120 GPR162Q16538 588 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms