RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 RGS2P41220 211 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 BECN1Q14457 450 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 KIAA1755Q5JYT7 1200 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.33
HMGCL-204ENST00000436439 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.33
HMGCL-204ENST00000436439 PFASO15067 1338 aa12.96□□□□□ -0.34
HMGCL-204ENST00000436439 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 GPAA1O43292 621 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 MBD4O95243 580 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 LHX8Q68G74 356 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 LBX2Q6XYB7 198 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 CCDC129Q6ZRS4 1044 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 APBA2Q99767 749 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 ZMYM6O95789 1325 aa12.95□□□□□ -0.34
HMGCL-204ENST00000436439 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
HMGCL-204ENST00000436439 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 GNAT2P19087 354 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 PTPREP23469 700 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 SIAH1Q8IUQ4 282 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
HMGCL-204ENST00000436439 NPLOC4Q8TAT6 608 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 C11orf49Q9H6J7 331 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-204ENST00000436439 SOX1O00570 391 aaPredicted RBP12.94□□□□□ -0.34
HMGCL-204ENST00000436439 FOXP2O15409 715 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 AKR1B1P15121 316 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 CCNA1P78396 465 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
HMGCL-204ENST00000436439 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
HMGCL-204ENST00000436439 CWC22Q9HCG8 908 aaKnown RBP12.94□□□□□ -0.34
HMGCL-204ENST00000436439 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 COL6A1P12109 1028 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 SYN1P17600 705 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 GRB14Q14449 540 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 RABEP1Q15276 862 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 ALX1Q15699 326 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 GDF15Q99988 308 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 PLXNA1Q9UIW2 1896 aa12.93□□□□□ -0.34
HMGCL-204ENST00000436439 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
HMGCL-204ENST00000436439 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 USP17L21D6R901 530 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 COG2Q14746 738 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 C12orf60Q5U649 245 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 CREB3L3Q68CJ9 461 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
HMGCL-204ENST00000436439 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
HMGCL-204ENST00000436439 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 SLC27A2O14975 620 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 IGHA2P01877 340 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 HOXC6P09630 235 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 CYP2C19P33261 490 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 CDK8P49336 464 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 ICA1Q05084 483 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 LRRC26Q2I0M4 334 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 C16orf86Q6ZW13 317 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 SPICE1Q8N0Z3 855 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 SNX21Q969T3 373 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 LRCH3Q96II8 777 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 TM6SF1Q9BZW5 370 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 IVNS1ABPQ9Y6Y0 642 aa12.91□□□□□ -0.34
HMGCL-204ENST00000436439 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 FGAP02671 866 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 ERCC3P19447 782 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 ADORA2AP29274 412 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 DSG3P32926 999 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 KRT32Q14532 448 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 CTR9Q6PD62 1173 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
HMGCL-204ENST00000436439 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
HMGCL-204ENST00000436439 COBLO75128 1261 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 326.3 ms