RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SLC1A4P43007 532 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 LARGE2Q8N3Y3 721 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 RAD17O75943 681 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 AKR1B1P15121 316 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 USH1GQ495M9 461 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 SP8Q8IXZ3 490 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 ZMYND15Q9H091 742 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 KCNF1Q9H3M0 494 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 PP2D1A8MPX8 630 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 TECP42680 631 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 PKN1Q16512 942 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 AOC3Q16853 763 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 TMEM266Q2M3C6 531 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 REXO1Q8N1G1 1221 aaKnown RBP13.77□□□□□ -0.2
CLDN4-203ENST00000435050 CALML4Q96GE6 196 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 CRAMP1Q96RY5 1269 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 MAP3K14Q99558 947 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 MTA3Q9BTC8 594 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 TJP1Q07157 1748 aa13.77□□□□□ -0.2
CLDN4-203ENST00000435050 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.2
CLDN4-203ENST00000435050 TRIM47Q96LD4 638 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 PHF20Q9BVI0 1012 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 SNAP25P60880 206 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 LRRC8AQ8IWT6 810 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 SPICE1Q8N0Z3 855 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 RTFDC1Q9BY42 306 aaPredicted RBP13.77□□□□□ -0.21
CLDN4-203ENST00000435050 VPS16Q9H269 839 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 KCNQ5Q9NR82 932 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
CLDN4-203ENST00000435050 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
CLDN4-203ENST00000435050 NEMFO60524 1076 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 MLKLQ8NB16 471 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 KIAA1524Q8TCG1 905 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLDN4-203ENST00000435050 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 GLI3P10071 1580 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 TANGO6Q9C0B7 1094 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 TDRD3Q9H7E2 651 aaKnown RBP13.76□□□□□ -0.21
CLDN4-203ENST00000435050 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
CLDN4-203ENST00000435050 COL16A1Q07092 1604 aaPredicted RBP13.76□□□□□ -0.21
CLDN4-203ENST00000435050 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
CLDN4-203ENST00000435050 CRKP46108 304 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 PLA2G4DQ86XP0 818 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 CERKLQ49MI3 558 aaPredicted RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 FEZ1Q99689 392 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 SYNRGQ9UMZ2 1314 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 NUP188Q5SRE5 1749 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 ADCY7P51828 1080 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 RCAN1P53805 252 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 ADKP55263 362 aaKnown RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 UBE2SQ16763 222 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 GPIHBP1Q8IV16 184 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 NUP88Q99567 741 aaPredicted RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 MNS1Q8NEH6 495 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 NOC3LQ8WTT2 800 aaKnown RBP13.75□□□□□ -0.21
CLDN4-203ENST00000435050 EXOC1Q9NV70 894 aa13.75□□□□□ -0.21
CLDN4-203ENST00000435050 RAD51AP2Q09MP3 1159 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 NFIAQ12857 509 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 GRM4Q14833 912 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 SRGNP10124 158 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
CLDN4-203ENST00000435050 TMEM232C9JQI7 657 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 ECE2O60344 883 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 URI1O94763 535 aaPredicted RBP13.74□□□□□ -0.21
CLDN4-203ENST00000435050 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 RCSD1Q6JBY9 416 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 TMC4Q7Z404 712 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 CABP7Q86V35 215 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 DPF2Q92785 391 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
CLDN4-203ENST00000435050 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms