RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 RAD21O60216 631 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 IGHA2P01877 340 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 KCTD2Q14681 263 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 KIAA1755Q5JYT7 1200 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 CLEC10AQ8IUN9 316 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 LBHD1Q9BQE6 289 aaPredicted RBP17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 ADAMTS5Q9UNA0 930 aa17.79■□□□□ 0.44
RPUSD3-208ENST00000433972 RNF113AO15541 343 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 TMEM132BQ14DG7 1078 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 RIOX2Q8IUF8 465 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 MMP19Q99542 508 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 DIS3Q9Y2L1 958 aaKnown RBP17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
RPUSD3-208ENST00000433972 TTC41PQ6P2S7 1318 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 VWA5AO00534 786 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 COBLO75128 1261 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 STAT3P40763 770 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 TDO2P48775 406 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 MAML3Q96JK9 1138 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 SYNPO2Q9UMS6 1093 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 LAMA3Q16787 3333 aa17.77■□□□□ 0.44
RPUSD3-208ENST00000433972 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 MINDY4BA8MYZ0 360 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 GPAA1O43292 621 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 CHGBP05060 677 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 APPP05067 770 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 SLC3A2P08195 630 aaKnown RBP17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 TRPV1Q8NER1 839 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 LRCH3Q96II8 777 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 CTDP1Q9Y5B0 961 aaPredicted RBP17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 PCDHB15Q9Y5E8 787 aa17.76■□□□□ 0.43
RPUSD3-208ENST00000433972 SOX1O00570 391 aaPredicted RBP17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 FAM83BQ5T0W9 1011 aa17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 MSL3Q8N5Y2 521 aaKnown RBP17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 PRPF38AQ8NAV1 312 aaKnown RBP17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 TEX13BQ9BXU2 312 aa17.75■□□□□ 0.43
RPUSD3-208ENST00000433972 ALPK3Q96L96 1907 aa17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 RARBP10826 455 aa17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 RASA1P20936 1047 aa17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 ATN1P54259 1190 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 PDE4BQ07343 736 aa17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 FBXO28Q9NVF7 368 aa17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 ZNF214Q9UL59 606 aaPredicted RBP17.74■□□□□ 0.43
RPUSD3-208ENST00000433972 PATL2C9JE40 543 aaKnown RBP17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 F5H6K3 240 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 SMIM22K7EJ46 135 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 RTP1P59025 263 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 KLRC3Q07444 240 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 RNF180Q86T96 592 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
RPUSD3-208ENST00000433972 MYH8P13535 1937 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 ZBED4O75132 1171 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 TTLL1O95922 423 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 NDUFB10O96000 172 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 FDX1P10109 184 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 DEFB123Q8N688 67 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 XPNPEP3Q9NQH7 507 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 CLIP2Q9UDT6 1046 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
RPUSD3-208ENST00000433972 MYH7P12883 1935 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 ATP2A1O14983 1001 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 AKR1A1P14550 325 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 HDAC1Q13547 482 aaPredicted RBP17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 LRRC41Q15345 812 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 ZNF792Q3KQV3 632 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 TSHZ3Q63HK5 1081 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 MKL1Q969V6 931 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 FSD1Q9BTV5 496 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 NAPBQ9H115 298 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 FBXO40Q9UH90 709 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 FEM1BQ9UK73 627 aa17.71■□□□□ 0.43
RPUSD3-208ENST00000433972 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 PGK2P07205 417 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 TSPY3P0CV98 308 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 TSPY8P0CW00 308 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 OAZ1P54368 228 aa17.7■□□□□ 0.42
RPUSD3-208ENST00000433972 SNX17Q15036 470 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms