RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
SMARCE1-205ENST00000431889 HOXC6P09630 235 aa17.1■□□□□ 0.33
SMARCE1-205ENST00000431889 CAPN2P17655 700 aa17.1■□□□□ 0.33
SMARCE1-205ENST00000431889 LPAR1Q92633 364 aa17.1■□□□□ 0.33
SMARCE1-205ENST00000431889 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
SMARCE1-205ENST00000431889 PCDHB15Q9Y5E8 787 aa17.1■□□□□ 0.33
SMARCE1-205ENST00000431889 SMCHD1A6NHR9 2005 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 WDR46O15213 610 aaKnown RBP17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 APPP05067 770 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 RASA1P20936 1047 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 KBTBD3Q8NAB2 608 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 CCDC17Q96LX7 622 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 PLXNA1Q9UIW2 1896 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
SMARCE1-205ENST00000431889 MYH4Q9Y623 1939 aa17.08■□□□□ 0.33
SMARCE1-205ENST00000431889 GPAA1O43292 621 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 LENG1Q96BZ8 264 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 MAML3Q96JK9 1138 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 SH2D4AQ9H788 454 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 ATP11BQ9Y2G3 1177 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 EYSQ5T1H1 3165 aa17.08■□□□□ 0.32
SMARCE1-205ENST00000431889 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
SMARCE1-205ENST00000431889 TAL1P17542 331 aaPredicted RBP17.07■□□□□ 0.32
SMARCE1-205ENST00000431889 TDO2P48775 406 aa17.07■□□□□ 0.32
SMARCE1-205ENST00000431889 MMP19Q99542 508 aa17.07■□□□□ 0.32
SMARCE1-205ENST00000431889 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
SMARCE1-205ENST00000431889 VWA5AO00534 786 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 STRNO43815 780 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 IGHA2P01877 340 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 FCER1AP12319 257 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 BMP8BP34820 402 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 SHCBP1Q8NEM2 672 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 APPBP2Q92624 585 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 MROH8Q9H579 483 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 GOPCQ9HD26 462 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 RTP1P59025 263 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 OLFML2BQ68BL8 750 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 MB21D1Q8N884 522 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 PPP1R9AQ9ULJ8 1098 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 RIPK3Q9Y572 518 aa17.06■□□□□ 0.32
SMARCE1-205ENST00000431889 A0A1W2PPC1 479 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 DNM1LO00429 736 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 NDUFB10O96000 172 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 STAT3P40763 770 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 ADCYAP1R1P41586 468 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
SMARCE1-205ENST00000431889 F5H6K3 240 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 SEPT4O43236 478 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 KLRC3Q07444 240 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 DEFB123Q8N688 67 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 ADAMTS5Q9UNA0 930 aa17.04■□□□□ 0.32
SMARCE1-205ENST00000431889 MSCO60682 206 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 PGK1P00558 417 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 TRIM60Q495X7 471 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 SBK1Q52WX2 424 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 RIOX2Q8IUF8 465 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 PI4K2BQ8TCG2 481 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 CEP95Q96GE4 821 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 FAM161BQ96MY7 647 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 A0A0C4DFX4 3053 aa17.03■□□□□ 0.32
SMARCE1-205ENST00000431889 KBTBD13C9JR72 458 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 KCTD2Q14681 263 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 LRRC41Q15345 812 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 SNRNP48Q6IEG0 339 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 RASGRP2Q7LDG7 609 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 SH3RF1Q7Z6J0 888 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 IFNL3Q8IZI9 196 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 SLF1Q9BQI6 1058 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 SLC5A4Q9NY91 659 aa17.02■□□□□ 0.32
SMARCE1-205ENST00000431889 UNC80Q8N2C7 3258 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 LTBP2Q14767 1821 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 SLC25A27O95847 323 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 SNAP25P60880 206 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 ZNF792Q3KQV3 632 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 ARRDC4Q8NCT1 418 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 CRBNQ96SW2 442 aa17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 LBHD1Q9BQE6 289 aaPredicted RBP17.02■□□□□ 0.31
SMARCE1-205ENST00000431889 MTMR7Q9Y216 660 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms