RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 JAG1P78504 1218 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 KCNC4Q03721 635 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 GABPAQ06546 454 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 TRIM32Q13049 653 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 ZNF787Q6DD87 383 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 EAF2Q96CJ1 260 aaPredicted RBP10.05□□□□□ -0.8
CDH13-203ENST00000431540 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 LBHD1Q9BQE6 289 aaPredicted RBP10.05□□□□□ -0.8
CDH13-203ENST00000431540 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
CDH13-203ENST00000431540 PRKAG2Q9UGJ0 569 aa10.05□□□□□ -0.8
CDH13-203ENST00000431540 DBNLQ9UJU6 430 aaKnown RBP10.05□□□□□ -0.8
CDH13-203ENST00000431540 SEPT4O43236 478 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 BCAR3O75815 825 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 CNMDO75829 334 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 SLC25A27O95847 323 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 VCAM1P19320 739 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 COPB2P35606 906 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 SNX17Q15036 470 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 TMEM57Q8N5G2 664 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 MSL3Q8N5Y2 521 aaKnown RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 FEZ1Q99689 392 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 RIOK1Q9BRS2 568 aaKnown RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 CRNKL1Q9BZJ0 848 aaKnown RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 PIH1D3Q9NQM4 214 aaKnown RBP10.04□□□□□ -0.8
CDH13-203ENST00000431540 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 ATP8A2Q9NTI2 1148 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 ADAMTS5Q9UNA0 930 aa10.04□□□□□ -0.8
CDH13-203ENST00000431540 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 A0A0G2JMZ2 1700 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 STK25O00506 426 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 PPP1R37O75864 691 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 IDH1O75874 414 aaKnown RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 GDF11O95390 407 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 CYBAP13498 195 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 CCND3P30281 292 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 SHMT1P34896 483 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 LRRC26Q2I0M4 334 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 ANKK1Q8NFD2 765 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 SENP6Q9GZR1 1112 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 COL11A1P12107 1806 aaPredicted RBP10.03□□□□□ -0.8
CDH13-203ENST00000431540 LTBP2Q14767 1821 aa10.03□□□□□ -0.8
CDH13-203ENST00000431540 RAB11FIP3O75154 756 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 DYNLL1P63167 89 aaKnown RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 RAB3GAP1Q15042 981 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 CCL14Q16627 93 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 SLC39A5Q6ZMH5 540 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 NYAP1Q6ZVC0 841 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 CLASRPQ8N2M8 674 aaKnown RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 CLUAP1Q96AJ1 413 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 SPATC1LQ9H0A9 340 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 RPAP3Q9H6T3 665 aaPredicted RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 ARHGEF10LQ9HCE6 1279 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 TMX2Q9Y320 296 aa10.02□□□□□ -0.81
CDH13-203ENST00000431540 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.81
CDH13-203ENST00000431540 BAZ2AQ9UIF9 1905 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 MYO9BQ13459 2157 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 KBTBD13C9JR72 458 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 WDR46O15213 610 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 HMMRO75330 724 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 SYN1P17600 705 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 GUCY1A2P33402 732 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 PLCD1P51178 756 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 FOSBP53539 338 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 SMAD3P84022 425 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 SLC9C2Q5TAH2 1124 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 AMOTL1Q8IY63 956 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 KIF1BPQ96EK5 621 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 TOX2Q96NM4 488 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 MOV10L1Q9BXT6 1211 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 SEZ6LQ9BYH1 1024 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 CCDC8Q9H0W5 538 aaPredicted RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 KANSL2Q9H9L4 492 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 SAP30BPQ9UHR5 308 aaKnown RBP10.01□□□□□ -0.81
CDH13-203ENST00000431540 SYNPO2Q9UMS6 1093 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 TACC3Q9Y6A5 838 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
CDH13-203ENST00000431540 FCER1AP12319 257 aa10□□□□□ -0.81
CDH13-203ENST00000431540 ADORA2AP29274 412 aa10□□□□□ -0.81
CDH13-203ENST00000431540 DSG2Q14126 1118 aa10□□□□□ -0.81
CDH13-203ENST00000431540 CEP85Q6P2H3 762 aa10□□□□□ -0.81
CDH13-203ENST00000431540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10□□□□□ -0.81
CDH13-203ENST00000431540 NPLOC4Q8TAT6 608 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms