RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 PAWRQ96IZ0 340 aaKnown RBP10.84□□□□□ -0.67
HDAC9-211ENST00000430454 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
HDAC9-211ENST00000430454 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
HDAC9-211ENST00000430454 CLIP2Q9UDT6 1046 aa10.84□□□□□ -0.67
HDAC9-211ENST00000430454 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
HDAC9-211ENST00000430454 F5H6K3 240 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 HIP1O00291 1037 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 PEX10O60683 326 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 ADORA2AP29274 412 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 CNGA1P29973 690 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 STAT3P40763 770 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 NT5C2P49902 561 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 KLRC3Q07444 240 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 HABP4Q5JVS0 413 aaKnown RBP10.83□□□□□ -0.68
HDAC9-211ENST00000430454 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 RIOX2Q8IUF8 465 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 CLEC10AQ8IUN9 316 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 NEDD1Q8NHV4 660 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 OTUD7AQ8TE49 926 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-211ENST00000430454 MKL1Q969V6 931 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 ATG4CQ96DT6 458 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 MMP19Q99542 508 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 TEX13BQ9BXU2 312 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 NRBP1Q9UHY1 535 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 FEM1BQ9UK73 627 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 ADAMTS5Q9UNA0 930 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
HDAC9-211ENST00000430454 BRCA2P51587 3418 aa10.83□□□□□ -0.68
HDAC9-211ENST00000430454 TSPY2A6NKD2 308 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 VWA5AO00534 786 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 PCP11498 1178 aaKnown RBP10.82□□□□□ -0.68
HDAC9-211ENST00000430454 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 TFAP4Q01664 338 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 TRIM32Q13049 653 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 ALX1Q15699 326 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 CCL14Q16627 93 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 POTEEQ6S8J3 1075 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 CHD1LQ86WJ1 897 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 SMC5Q8IY18 1101 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 ARRDC4Q8NCT1 418 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 GMCL1P1Q8NEA9 526 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 CHURC1Q8WUH1 139 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 EPB41L4AQ9HCS5 686 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-211ENST00000430454 MTMR4Q9NYA4 1195 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 DDX20Q9UHI6 824 aaKnown RBP10.82□□□□□ -0.68
HDAC9-211ENST00000430454 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
HDAC9-211ENST00000430454 DIS3Q9Y2L1 958 aaKnown RBP10.82□□□□□ -0.68
HDAC9-211ENST00000430454 SALL3Q9BXA9 1300 aa10.82□□□□□ -0.68
HDAC9-211ENST00000430454 PRDM1O75626 825 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 NDUFB10O96000 172 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 CCND3P30281 292 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-211ENST00000430454 OAZ1P54368 228 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 KIAA1755Q5JYT7 1200 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 B4GALNT3Q6L9W6 998 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 FAM160B2Q86V87 743 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 CEP95Q96GE4 821 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
HDAC9-211ENST00000430454 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC9-211ENST00000430454 ANAPC4Q9UJX5 808 aa10.81□□□□□ -0.68
HDAC9-211ENST00000430454 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 PLIN4Q96Q06 1357 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 IGKV6D-41A0A0C4DH26 115 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 A0A1W2PPC1 479 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 RANBP6O60518 1105 aaKnown RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 BMP3P12645 472 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 CYP2C19P33261 490 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 NUCB1Q02818 461 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 SNRNP48Q6IEG0 339 aaKnown RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 DDX11Q96FC9 970 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 RNF41Q9H4P4 317 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 DIAPH3Q9NSV4 1193 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 PNMA2Q9UL42 364 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 COLQQ9Y215 455 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-211ENST00000430454 CNPY2Q9Y2B0 182 aa10.8□□□□□ -0.68
HDAC9-211ENST00000430454 KBTBD13C9JR72 458 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 SMIM22K7EJ46 135 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 DNM1LO00429 736 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 ATP2A1O14983 1001 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 SEPT4O43236 478 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 ORC4O43929 436 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 SLC1A4P43007 532 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 STAT2P52630 851 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 CCDC178Q5BJE1 867 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 FAM47AQ5JRC9 791 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 LHX8Q68G74 356 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms