RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RWDD1Q9H446 243 aaPredicted RBP21.94■■□□□ 1.1
PSPC1-202ENST00000427943 IGKV6D-41A0A0C4DH26 115 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 IGHDP01880 384 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 PPARAQ07869 468 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 NCAPG2Q86XI2 1143 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 ZNF287Q9HBT7 754 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 NYAP2Q9P242 653 aa21.93■■□□□ 1.1
PSPC1-202ENST00000427943 CAPN2P17655 700 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 ADORA2AP29274 412 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 TMEM132BQ14DG7 1078 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 VPS53Q5VIR6 699 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 SHCBP1Q8NEM2 672 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 CEP95Q96GE4 821 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 CLIP2Q9UDT6 1046 aa21.92■■□□□ 1.1
PSPC1-202ENST00000427943 PLIN4Q96Q06 1357 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 NDUFB10O96000 172 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 HOXC6P09630 235 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 PDE4BQ07343 736 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 FAM47AQ5JRC9 791 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 MFSD14CQ5VZR4 134 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 FAM227BQ96M60 508 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 PPP1R9AQ9ULJ8 1098 aa21.91■■□□□ 1.1
PSPC1-202ENST00000427943 A0A0D9SFI3 127 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 TRIM6-TRIM34B2RNG4 842 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 F5H6K3 240 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 SLC3A2P08195 630 aaKnown RBP21.9■■□□□ 1.1
PSPC1-202ENST00000427943 TSPY3P0CV98 308 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 TSPY8P0CW00 308 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 CYP2C19P33261 490 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 CTDSPL2Q05D32 466 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 KLRC3Q07444 240 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 NECAB2Q7Z6G3 386 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 DPP9Q86TI2 863 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 LRRC47Q8N1G4 583 aaKnown RBP21.9■■□□□ 1.1
PSPC1-202ENST00000427943 ANKLE1Q8NAG6 615 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 OGDHLQ9ULD0 1010 aa21.9■■□□□ 1.1
PSPC1-202ENST00000427943 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
PSPC1-202ENST00000427943 VWA5AO00534 786 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 MNX1P50219 401 aaPredicted RBP21.89■■□□□ 1.09
PSPC1-202ENST00000427943 HABP4Q5JVS0 413 aaKnown RBP21.89■■□□□ 1.09
PSPC1-202ENST00000427943 CHD1LQ86WJ1 897 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 RILPL2Q969X0 211 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 MROH8Q9H579 483 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 HELLSQ9NRZ9 838 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 ADAMTS5Q9UNA0 930 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 COLQQ9Y215 455 aaPredicted RBP21.89■■□□□ 1.09
PSPC1-202ENST00000427943 LAMA4Q16363 1823 aa21.89■■□□□ 1.09
PSPC1-202ENST00000427943 STRNO43815 780 aa21.88■■□□□ 1.09
PSPC1-202ENST00000427943 TFAP4Q01664 338 aa21.88■■□□□ 1.09
PSPC1-202ENST00000427943 NEDD1Q8NHV4 660 aa21.88■■□□□ 1.09
PSPC1-202ENST00000427943 INCENPQ9NQS7 918 aa21.88■■□□□ 1.09
PSPC1-202ENST00000427943 ZNF214Q9UL59 606 aaPredicted RBP21.88■■□□□ 1.09
PSPC1-202ENST00000427943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.88■■□□□ 1.09
PSPC1-202ENST00000427943 EVI5O60447 810 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 COBLO75128 1261 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 TTLL1O95922 423 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 NUCB1Q02818 461 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 NMIQ13287 307 aaPredicted RBP21.87■■□□□ 1.09
PSPC1-202ENST00000427943 LHX8Q68G74 356 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 REPS2Q8NFH8 660 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 SLF1Q9BQI6 1058 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 NBPF3Q9H094 633 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 C11orf49Q9H6J7 331 aa21.87■■□□□ 1.09
PSPC1-202ENST00000427943 SLC25A27O95847 323 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 FCER1AP12319 257 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 CNGA1P29973 690 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 CHRDL2Q6WN34 429 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 ZNF589Q86UQ0 364 aaPredicted RBP21.86■■□□□ 1.09
PSPC1-202ENST00000427943 RIOX2Q8IUF8 465 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 PLEKHM2Q8IWE5 1019 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 TRPV1Q8NER1 839 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 NR2E3Q9Y5X4 410 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 TACC3Q9Y6A5 838 aa21.86■■□□□ 1.09
PSPC1-202ENST00000427943 STAT3P40763 770 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 MCMDC2Q4G0Z9 681 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 OLFML2BQ68BL8 750 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 ABRAQ8N0Z2 381 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 MKL1Q969V6 931 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 MMP19Q99542 508 aa21.85■■□□□ 1.09
PSPC1-202ENST00000427943 PFASO15067 1338 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 TSPY2A6NKD2 308 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 IGHA2P01877 340 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 CYBAP13498 195 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 GMCL1P1Q8NEA9 526 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 KIFC2Q96AC6 838 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 DDX20Q9UHI6 824 aaKnown RBP21.84■■□□□ 1.09
PSPC1-202ENST00000427943 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
PSPC1-202ENST00000427943 MCM3APO60318 1980 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 SMCHD1A6NHR9 2005 aa21.84■■□□□ 1.09
PSPC1-202ENST00000427943 CCDC171Q6TFL3 1326 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 NMT2O60551 498 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 PGK2P07205 417 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 SLC4A3P48751 1232 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 IRX6P78412 446 aaPredicted RBP21.83■■□□□ 1.09
PSPC1-202ENST00000427943 SLFN13Q68D06 897 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 SNRNP48Q6IEG0 339 aaKnown RBP21.83■■□□□ 1.09
PSPC1-202ENST00000427943 C7orf61Q8IZ16 206 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 PRPF38AQ8NAV1 312 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms