RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 HMMRO75330 724 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 FLOT1O75955 427 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
ATG4B-209ENST00000425239 ICA1Q05084 483 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 FAM109BQ6ICB4 259 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-209ENST00000425239 ARRDC4Q8NCT1 418 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 REPS2Q8NFH8 660 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 FBXO28Q9NVF7 368 aa18.07■□□□□ 0.48
ATG4B-209ENST00000425239 GREB1LQ9C091 1923 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-209ENST00000425239 MYH7P12883 1935 aa18.06■□□□□ 0.48
ATG4B-209ENST00000425239 C1orf53Q5VUE5 145 aa18.06■□□□□ 0.48
ATG4B-209ENST00000425239 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
ATG4B-209ENST00000425239 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
ATG4B-209ENST00000425239 LRRC41Q15345 812 aa18.05■□□□□ 0.48
ATG4B-209ENST00000425239 ZNF792Q3KQV3 632 aa18.05■□□□□ 0.48
ATG4B-209ENST00000425239 RIOX2Q8IUF8 465 aa18.05■□□□□ 0.48
ATG4B-209ENST00000425239 GUCD1Q96NT3 240 aa18.05■□□□□ 0.48
ATG4B-209ENST00000425239 KANSL2Q9H9L4 492 aa18.05■□□□□ 0.48
ATG4B-209ENST00000425239 ZNF214Q9UL59 606 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-209ENST00000425239 VWA5AO00534 786 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 SLC25A27O95847 323 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 FCER1AP12319 257 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 PLS1Q14651 629 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
ATG4B-209ENST00000425239 SH2D4AQ9H788 454 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 SLC4A4Q9Y6R1 1079 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 CUL9Q8IWT3 2517 aa18.04■□□□□ 0.48
ATG4B-209ENST00000425239 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-209ENST00000425239 TAL1P17542 331 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-209ENST00000425239 ADCYAP1R1P41586 468 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 FAM47AQ5JRC9 791 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 C20orf194Q5TEA3 1177 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
ATG4B-209ENST00000425239 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■□□□ 13.4
ATG4B-209ENST00000425239 SLC5A4Q9NY91 659 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 PPP1R9AQ9ULJ8 1098 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 DIS3Q9Y2L1 958 aaKnown RBP18.03■□□□□ 0.48
ATG4B-209ENST00000425239 PLXNA1Q9UIW2 1896 aa18.03■□□□□ 0.48
ATG4B-209ENST00000425239 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 GSG1L2A8MUP6 293 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 PGK2P07205 417 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 ZNF865P0CJ78 1059 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-209ENST00000425239 ITGB8P26012 769 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 STAT3P40763 770 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 SHHQ15465 462 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 TRIM60Q495X7 471 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 SBK1Q52WX2 424 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 C9orf50Q5SZB4 431 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-209ENST00000425239 LBHD1Q9BQE6 289 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-209ENST00000425239 TINF2Q9BSI4 451 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 PDLIM7Q9NR12 457 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 PHF24Q9UPV7 400 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 ATP11BQ9Y2G3 1177 aa18.02■□□□□ 0.48
ATG4B-209ENST00000425239 MUC3AQ02505 3323 aa18.01■□□□□ 0.47
ATG4B-209ENST00000425239 RASA1P20936 1047 aa18.01■□□□□ 0.47
ATG4B-209ENST00000425239 FAM83BQ5T0W9 1011 aa18.01■□□□□ 0.47
ATG4B-209ENST00000425239 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
ATG4B-209ENST00000425239 IGKV6D-41A0A0C4DH26 115 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 KBTBD13C9JR72 458 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 BADQ92934 168 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 OSBP2Q969R2 916 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 FERMT2Q96AC1 680 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 MMP19Q99542 508 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 RIPK3Q9Y572 518 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 ROBO3Q96MS0 1386 aa18■□□□□ 0.47
ATG4B-209ENST00000425239 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 TLE2Q04725 743 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 GIMAP6Q6P9H5 292 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 NYAP2Q9P242 653 aa17.99■□□□□ 0.47
ATG4B-209ENST00000425239 ARPP21Q9UBL0 812 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-209ENST00000425239 F5H6K3 240 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 SNAI1O95863 264 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-209ENST00000425239 KLRC3Q07444 240 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 CCSAPQ6IQ19 270 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-209ENST00000425239 SAMD1Q6SPF0 538 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-209ENST00000425239 MAMDC4Q6UXC1 1216 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 KBTBD3Q8NAB2 608 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 MKL1Q969V6 931 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-209ENST00000425239 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 EPB41L4AQ9HCS5 686 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-209ENST00000425239 XPNPEP3Q9NQH7 507 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 ECHDC1Q9NTX5 307 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 PRKAG2Q9UGJ0 569 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
ATG4B-209ENST00000425239 ATP2A1O14983 1001 aa17.97■□□□□ 0.47
ATG4B-209ENST00000425239 PGK1P00558 417 aa17.97■□□□□ 0.47
ATG4B-209ENST00000425239 EPHB4P54760 987 aa17.97■□□□□ 0.47
ATG4B-209ENST00000425239 KCTD2Q14681 263 aa17.97■□□□□ 0.47
ATG4B-209ENST00000425239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
ATG4B-209ENST00000425239 AMOTL1Q8IY63 956 aa17.97■□□□□ 0.47
ATG4B-209ENST00000425239 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
ATG4B-209ENST00000425239 NDUFB10O96000 172 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms