RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 NAPBQ9H115 298 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 NYAP2Q9P242 653 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 FRMPD3Q5JV73 1810 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 ZNF236Q9UL36 1845 aa25.43■■□□□ 1.66
PTPN4-202ENST00000420482 A0A1W2PPC1 479 aa25.43■■□□□ 1.66
PTPN4-202ENST00000420482 CNGA1P29973 690 aa25.43■■□□□ 1.66
PTPN4-202ENST00000420482 CCND3P30281 292 aaPredicted RBP25.43■■□□□ 1.66
PTPN4-202ENST00000420482 COPB2P35606 906 aa25.43■■□□□ 1.66
PTPN4-202ENST00000420482 HDAC1Q13547 482 aaPredicted RBP25.43■■□□□ 1.66
PTPN4-202ENST00000420482 FCER1AP12319 257 aa25.42■■□□□ 1.66
PTPN4-202ENST00000420482 ZMYM1Q5SVZ6 1142 aa25.42■■□□□ 1.66
PTPN4-202ENST00000420482 OLFML2BQ68BL8 750 aa25.42■■□□□ 1.66
PTPN4-202ENST00000420482 OTUD7AQ8TE49 926 aaPredicted RBP25.42■■□□□ 1.66
PTPN4-202ENST00000420482 EPB41L4AQ9HCS5 686 aaPredicted RBP25.42■■□□□ 1.66
PTPN4-202ENST00000420482 RLFQ13129 1914 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 FAM83BQ5T0W9 1011 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 NPLOC4Q8TAT6 608 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 EVI5LQ96CN4 794 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 FLRT1Q9NZU1 646 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 PPP1R9AQ9ULJ8 1098 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 SYNPO2Q9UMS6 1093 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 ADAMTS5Q9UNA0 930 aa25.41■■□□□ 1.66
PTPN4-202ENST00000420482 PPP4R3BQ5MIZ7 849 aa25.4■■□□□ 1.66
PTPN4-202ENST00000420482 LHX8Q68G74 356 aa25.4■■□□□ 1.66
PTPN4-202ENST00000420482 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.4■■□□□ 1.66
PTPN4-202ENST00000420482 CTDP1Q9Y5B0 961 aaPredicted RBP25.4■■□□□ 1.66
PTPN4-202ENST00000420482 F5H6K3 240 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 VWA5AO00534 786 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 TSPY3P0CV98 308 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 TSPY8P0CW00 308 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 CYP2C19P33261 490 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 KLRC3Q07444 240 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 TMEM132BQ14DG7 1078 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 RIOX2Q8IUF8 465 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 SEC62Q99442 399 aaKnown RBP25.39■■□□□ 1.66
PTPN4-202ENST00000420482 SLF1Q9BQI6 1058 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 CLIP2Q9UDT6 1046 aa25.39■■□□□ 1.66
PTPN4-202ENST00000420482 DDX20Q9UHI6 824 aaKnown RBP25.39■■□□□ 1.66
PTPN4-202ENST00000420482 GREB1LQ9C091 1923 aaPredicted RBP25.39■■□□□ 1.65
PTPN4-202ENST00000420482 TTLL1O95922 423 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 STAT3P40763 770 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 KCTD2Q14681 263 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 TICAM2Q86XR7 235 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 C7orf61Q8IZ16 206 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 FBXO28Q9NVF7 368 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 STAP2Q9UGK3 403 aa25.38■■□□□ 1.65
PTPN4-202ENST00000420482 SALL3Q9BXA9 1300 aa25.37■■□□□ 1.65
PTPN4-202ENST00000420482 PRDM1O75626 825 aa25.37■■□□□ 1.65
PTPN4-202ENST00000420482 MNX1P50219 401 aaPredicted RBP25.37■■□□□ 1.65
PTPN4-202ENST00000420482 PPARAQ07869 468 aa25.37■■□□□ 1.65
PTPN4-202ENST00000420482 PRPF38AQ8NAV1 312 aaKnown RBP25.37■■□□□ 1.65
PTPN4-202ENST00000420482 MMP19Q99542 508 aa25.37■■□□□ 1.65
PTPN4-202ENST00000420482 RWDD1Q9H446 243 aaPredicted RBP25.37■■□□□ 1.65
PTPN4-202ENST00000420482 PARP14Q460N5 1801 aa25.37■■□□□ 1.65
PTPN4-202ENST00000420482 PDE1AP54750 535 aa25.36■■□□□ 1.65
PTPN4-202ENST00000420482 MKL1Q969V6 931 aa25.36■■□□□ 1.65
PTPN4-202ENST00000420482 MTMR4Q9NYA4 1195 aa25.36■■□□□ 1.65
PTPN4-202ENST00000420482 IGKV6D-41A0A0C4DH26 115 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 NDUFB10O96000 172 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 CYBAP13498 195 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 NEDD1Q8NHV4 660 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 CEP95Q96GE4 821 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 TEX13BQ9BXU2 312 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 HELLSQ9NRZ9 838 aa25.35■■□□□ 1.65
PTPN4-202ENST00000420482 COBLO75128 1261 aa25.34■■□□□ 1.65
PTPN4-202ENST00000420482 ZBED4O75132 1171 aa25.34■■□□□ 1.65
PTPN4-202ENST00000420482 COL6A1P12109 1028 aa25.34■■□□□ 1.65
PTPN4-202ENST00000420482 ARRDC4Q8NCT1 418 aa25.34■■□□□ 1.65
PTPN4-202ENST00000420482 MAML3Q96JK9 1138 aa25.34■■□□□ 1.65
PTPN4-202ENST00000420482 ZNF214Q9UL59 606 aaPredicted RBP25.34■■□□□ 1.65
PTPN4-202ENST00000420482 PLIN4Q96Q06 1357 aa25.33■■□□□ 1.65
PTPN4-202ENST00000420482 TFAP4Q01664 338 aa25.33■■□□□ 1.65
PTPN4-202ENST00000420482 GMCL1P1Q8NEA9 526 aa25.33■■□□□ 1.65
PTPN4-202ENST00000420482 NUP88Q99567 741 aaPredicted RBP25.33■■□□□ 1.65
PTPN4-202ENST00000420482 NRBP1Q9UHY1 535 aa25.33■■□□□ 1.65
PTPN4-202ENST00000420482 FEM1BQ9UK73 627 aa25.33■■□□□ 1.65
PTPN4-202ENST00000420482 DIS3Q9Y2L1 958 aaKnown RBP25.33■■□□□ 1.65
PTPN4-202ENST00000420482 PFASO15067 1338 aa25.33■■□□□ 1.64
PTPN4-202ENST00000420482 COL11A1P12107 1806 aaPredicted RBP25.33■■□□□ 1.64
PTPN4-202ENST00000420482 LAMA3Q16787 3333 aa25.32■■□□□ 1.64
PTPN4-202ENST00000420482 DNM1LO00429 736 aa25.32■■□□□ 1.64
PTPN4-202ENST00000420482 SEPT4O43236 478 aa25.32■■□□□ 1.64
PTPN4-202ENST00000420482 IGHA2P01877 340 aa25.32■■□□□ 1.64
PTPN4-202ENST00000420482 GDF15Q99988 308 aa25.32■■□□□ 1.64
PTPN4-202ENST00000420482 MYH4Q9Y623 1939 aa25.31■■□□□ 1.64
PTPN4-202ENST00000420482 TSPY2A6NKD2 308 aa25.31■■□□□ 1.64
PTPN4-202ENST00000420482 FDX1P10109 184 aa25.31■■□□□ 1.64
PTPN4-202ENST00000420482 BMP8BP34820 402 aa25.31■■□□□ 1.64
PTPN4-202ENST00000420482 SNRNP48Q6IEG0 339 aaKnown RBP25.31■■□□□ 1.64
PTPN4-202ENST00000420482 ISY1Q9ULR0 285 aaKnown RBP25.31■■□□□ 1.64
PTPN4-202ENST00000420482 TRIM6-TRIM34B2RNG4 842 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 SOX1O00570 391 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-202ENST00000420482 FAM47AQ5JRC9 791 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 CCDC129Q6ZRS4 1044 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 LRRC47Q8N1G4 583 aaKnown RBP25.3■■□□□ 1.64
PTPN4-202ENST00000420482 TRPV1Q8NER1 839 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 REPS2Q8NFH8 660 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 KIFC2Q96AC6 838 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 LNPKQ9C0E8 428 aa25.3■■□□□ 1.64
PTPN4-202ENST00000420482 SENP6Q9GZR1 1112 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms