RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 MTMR8Q96EF0 704 aa15.42■□□□□ 0.06
TMEM50B-201ENST00000420455 CSRNP1Q96S65 589 aa15.42■□□□□ 0.06
TMEM50B-201ENST00000420455 GOLPH3LQ9H4A5 285 aa15.42■□□□□ 0.06
TMEM50B-201ENST00000420455 CLIP2Q9UDT6 1046 aa15.42■□□□□ 0.06
TMEM50B-201ENST00000420455 SPTLC2O15270 562 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 CCDC173Q0VFZ6 552 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 SNW1Q13573 536 aaKnown RBP15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 USP17L2Q6R6M4 530 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 hCG_1984214I3L0E3 225 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 STXBP3O00186 592 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 JAG1P78504 1218 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 NR5A1Q13285 461 aa15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 ZNF713Q8N859 430 aaPredicted RBP15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 DDX19AQ9NUU7 478 aaKnown RBP15.41■□□□□ 0.06
TMEM50B-201ENST00000420455 SHTN1A0MZ66 631 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 TCP10L2B9ZVM9 353 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 SF3A1Q15459 793 aaKnown RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 NBPF9Q3BBW0 867 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 CLRN2A0PK11 232 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 WWC2Q6AWC2 1192 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 ATAD5Q96QE3 1844 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 FAM196BA6NMK8 535 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 MYO1BO43795 1136 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 CALML3P27482 149 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 EIF6P56537 245 aaKnown RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 CAMK4Q16566 473 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 ABCB5Q2M3G0 1257 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 TYW1BQ6NUM6 668 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 RRAGDQ9NQL2 400 aaPredicted RBP15.4■□□□□ 0.06
TMEM50B-201ENST00000420455 ZNF541Q9H0D2 1346 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 GOLGA8HP0CJ92 632 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 SHROOM1Q2M3G4 852 aaPredicted RBP15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 EARS2Q5JPH6 523 aaKnown RBP15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 LRRC47Q8N1G4 583 aaKnown RBP15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 TEPSINQ96N21 525 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 CLSTN2Q9H4D0 955 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 GMPSP49915 693 aaPredicted RBP15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 STK38Q15208 465 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 ZMYND12Q9H0C1 365 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 NUP62CLQ9H1M0 184 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 PCDHA4Q9UN74 947 aa15.39■□□□□ 0.05
TMEM50B-201ENST00000420455 ESYT2A0FGR8 921 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 TRAPPC10P48553 1259 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 GNL2Q13823 731 aaKnown RBP15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 GOLGA6L4A6NEF3 574 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 CMA1P23946 247 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 SEPT2Q15019 361 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 CCAR1Q8IX12 1150 aaKnown RBP15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 FMR1NBQ8N0W7 255 aaPredicted RBP15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
TMEM50B-201ENST00000420455 MPHOSPH10O00566 681 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 ADAMTS3O15072 1205 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 EGFRP00533 1210 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 LMNB1P20700 586 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 RRP36Q96EU6 259 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 TMEM39BQ9GZU3 492 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 HPSEQ9Y251 543 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 ME1P48163 572 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 MICALL2Q8IY33 904 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 FAM43AQ8N2R8 423 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 BLIDQ8IZY5 108 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 CABP5Q9NP86 173 aa15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 CNOT7Q9UIV1 285 aaKnown RBP15.37■□□□□ 0.05
TMEM50B-201ENST00000420455 PHF20L1A8MW92 1017 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 NLRP5P59047 1200 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 ICA1Q05084 483 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 MAP3K11Q16584 847 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 PPP1R18Q6NYC8 613 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 JMYQ8N9B5 988 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 PCDHB6Q9Y5E3 794 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 CUTAO60888 179 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 TNNI2P48788 182 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 RESP18Q5W5W9 173 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 CKAP2LQ8IYA6 745 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 GPC2Q8N158 579 aa15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 FBXO2Q9UK22 296 aaPredicted RBP15.36■□□□□ 0.05
TMEM50B-201ENST00000420455 MRVI1Q9Y6F6 885 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms