RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 MED15Q96RN5 788 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 COL24A1Q17RW2 1714 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 CYTH3O43739 400 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 HSPA1LP34931 641 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 INF2Q27J81 1249 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 NYAP1Q6ZVC0 841 aa11.31□□□□□ -0.6
LINC00494-201ENST00000416742 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
LINC00494-201ENST00000416742 TRAPPC10P48553 1259 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 IL17AQ16552 155 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 SLC35G1Q2M3R5 365 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 PLIN2Q99541 437 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
LINC00494-201ENST00000416742 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
LINC00494-201ENST00000416742 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
LINC00494-201ENST00000416742 ANKS1AQ92625 1134 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 PPP1R13BQ96KQ4 1090 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 ADKP55263 362 aaKnown RBP11.3□□□□□ -0.6
LINC00494-201ENST00000416742 DPYDQ12882 1025 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 RRAGBQ5VZM2 374 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 SYT10Q6XYQ8 523 aa11.3□□□□□ -0.6
LINC00494-201ENST00000416742 MYO1BO43795 1136 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 IL1R1P14778 569 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 PLCG2P16885 1265 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 TXLNAP40222 546 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 NAPAP54920 295 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 KARSQ15046 597 aaKnown RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 SLF2Q8IX21 1173 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 SPATA20Q8TB22 786 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 FLT1P17948 1338 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 G3V3G9 751 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 ERCC5P28715 1186 aaPredicted RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 CUL4BQ13620 913 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
LINC00494-201ENST00000416742 CCDC148Q8NFR7 591 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 GSDMAQ96QA5 445 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 PCDHA6Q9UN73 950 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 MAPK8IP1Q9UQF2 711 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 PCDHA8Q9Y5H6 950 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 TAF1LQ8IZX4 1826 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 PP2D1A8MPX8 630 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 ZNF18P17022 549 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 TCP11L1Q9NUJ3 509 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 CTNND2Q9UQB3 1225 aa11.29□□□□□ -0.6
LINC00494-201ENST00000416742 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 ONECUT3O60422 494 aaPredicted RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 STAT6P42226 847 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 RHBDL3P58872 404 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 SPATA1Q5VX52 437 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 ZC3H12CQ9C0D7 883 aaKnown RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 STXBP3O00186 592 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 TEX33O43247 280 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 CTIFO43310 598 aaKnown RBP11.28□□□□□ -0.6
LINC00494-201ENST00000416742 THSD7AQ9UPZ6 1657 aa11.28□□□□□ -0.6
LINC00494-201ENST00000416742 UBA7P41226 1012 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 LETM2Q2VYF4 491 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 SOGA3Q5TF21 947 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 SPECC1LQ69YQ0 1117 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 BARHL2Q9NY43 387 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 DAGLAQ9Y4D2 1042 aa11.27□□□□□ -0.6
LINC00494-201ENST00000416742 MORC2Q9Y6X9 1032 aaPredicted RBP11.27□□□□□ -0.6
LINC00494-201ENST00000416742 KIAA1551Q9HCM1 1747 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
LINC00494-201ENST00000416742 SCNN1DP51172 638 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 E2F4Q16254 413 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 TXNRD1Q16881 649 aa11.27□□□□□ -0.61
LINC00494-201ENST00000416742 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms