RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 IFNL3Q8IZI9 196 aa24.35■■□□□ 1.49
PTPRU-203ENST00000415600 ABRAQ8N0Z2 381 aa24.35■■□□□ 1.49
PTPRU-203ENST00000415600 ATG4CQ96DT6 458 aa24.35■■□□□ 1.49
PTPRU-203ENST00000415600 NYAP2Q9P242 653 aa24.35■■□□□ 1.49
PTPRU-203ENST00000415600 PCDH10Q9P2E7 1040 aa24.35■■□□□ 1.49
PTPRU-203ENST00000415600 SMIM22K7EJ46 135 aa24.34■■□□□ 1.49
PTPRU-203ENST00000415600 RASA1P20936 1047 aa24.34■■□□□ 1.49
PTPRU-203ENST00000415600 KIAA1755Q5JYT7 1200 aa24.34■■□□□ 1.49
PTPRU-203ENST00000415600 PPP4R3BQ5MIZ7 849 aa24.34■■□□□ 1.49
PTPRU-203ENST00000415600 SMC5Q8IY18 1101 aa24.34■■□□□ 1.49
PTPRU-203ENST00000415600 FCER1AP12319 257 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 ADORA2AP29274 412 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 ZMYM1Q5SVZ6 1142 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 CHRDL2Q6WN34 429 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 STK11IPQ8N1F8 1099 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 OTUD7AQ8TE49 926 aaPredicted RBP24.33■■□□□ 1.49
PTPRU-203ENST00000415600 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 SYNPO2Q9UMS6 1093 aa24.33■■□□□ 1.49
PTPRU-203ENST00000415600 OLFML2BQ68BL8 750 aa24.33■■□□□ 1.48
PTPRU-203ENST00000415600 TICAM2Q86XR7 235 aa24.33■■□□□ 1.48
PTPRU-203ENST00000415600 EPB41L4AQ9HCS5 686 aaPredicted RBP24.33■■□□□ 1.48
PTPRU-203ENST00000415600 CNGA1P29973 690 aa24.32■■□□□ 1.48
PTPRU-203ENST00000415600 CCND3P30281 292 aaPredicted RBP24.32■■□□□ 1.48
PTPRU-203ENST00000415600 DIS3LQ8TF46 1054 aaKnown RBP24.32■■□□□ 1.48
PTPRU-203ENST00000415600 PPP1R9AQ9ULJ8 1098 aa24.32■■□□□ 1.48
PTPRU-203ENST00000415600 CTDP1Q9Y5B0 961 aaPredicted RBP24.32■■□□□ 1.48
PTPRU-203ENST00000415600 FAM83BQ5T0W9 1011 aa24.31■■□□□ 1.48
PTPRU-203ENST00000415600 TSPY3P0CV98 308 aa24.3■■□□□ 1.48
PTPRU-203ENST00000415600 TSPY8P0CW00 308 aa24.3■■□□□ 1.48
PTPRU-203ENST00000415600 SLF1Q9BQI6 1058 aa24.3■■□□□ 1.48
PTPRU-203ENST00000415600 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTPRU-203ENST00000415600 STAP2Q9UGK3 403 aa24.3■■□□□ 1.48
PTPRU-203ENST00000415600 ADAMTS5Q9UNA0 930 aa24.3■■□□□ 1.48
PTPRU-203ENST00000415600 VWA5AO00534 786 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 TTLL1O95922 423 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 PDE4AP27815 886 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 STAT3P40763 770 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 KCTD2Q14681 263 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 TMEM132BQ14DG7 1078 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 RIOX2Q8IUF8 465 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 FLRT1Q9NZU1 646 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 CLIP2Q9UDT6 1046 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 DDX20Q9UHI6 824 aaKnown RBP24.29■■□□□ 1.48
PTPRU-203ENST00000415600 A0A0G2JMZ2 1700 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 F5H6K3 240 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 KLRC3Q07444 240 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 LHX8Q68G74 356 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 NPLOC4Q8TAT6 608 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 MMP19Q99542 508 aa24.29■■□□□ 1.48
PTPRU-203ENST00000415600 TRIOBPQ9H2D6 2365 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 ZNF236Q9UL36 1845 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 PRDM1O75626 825 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 CYP2C19P33261 490 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 PDE1AP54750 535 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 PPARAQ07869 468 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 PRPF38AQ8NAV1 312 aaKnown RBP24.28■■□□□ 1.48
PTPRU-203ENST00000415600 SEC62Q99442 399 aaKnown RBP24.28■■□□□ 1.48
PTPRU-203ENST00000415600 BACH2Q9BYV9 841 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 FBXO28Q9NVF7 368 aa24.28■■□□□ 1.48
PTPRU-203ENST00000415600 SALL3Q9BXA9 1300 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 NDUFB10O96000 172 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 C7orf61Q8IZ16 206 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 MKL1Q969V6 931 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 TEX13BQ9BXU2 312 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 HELLSQ9NRZ9 838 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 MTMR4Q9NYA4 1195 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 RLFQ13129 1914 aa24.27■■□□□ 1.48
PTPRU-203ENST00000415600 A0A1W2PPC1 479 aa24.26■■□□□ 1.47
PTPRU-203ENST00000415600 ZBED4O75132 1171 aa24.26■■□□□ 1.47
PTPRU-203ENST00000415600 NEDD1Q8NHV4 660 aa24.26■■□□□ 1.47
PTPRU-203ENST00000415600 CEP95Q96GE4 821 aa24.26■■□□□ 1.47
PTPRU-203ENST00000415600 PLIN4Q96Q06 1357 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 IGKV6D-41A0A0C4DH26 115 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 FXR1P51114 621 aaKnown RBP eCLIP24.25■■□□□ 1.47
PTPRU-203ENST00000415600 ARRDC4Q8NCT1 418 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 GMCL1P1Q8NEA9 526 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 RBM27Q9P2N5 1060 aaKnown RBP24.25■■□□□ 1.47
PTPRU-203ENST00000415600 NRBP1Q9UHY1 535 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 FEM1BQ9UK73 627 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 GREB1LQ9C091 1923 aaPredicted RBP24.25■■□□□ 1.47
PTPRU-203ENST00000415600 CYBAP13498 195 aa24.25■■□□□ 1.47
PTPRU-203ENST00000415600 MNX1P50219 401 aaPredicted RBP24.25■■□□□ 1.47
PTPRU-203ENST00000415600 COBLO75128 1261 aa24.24■■□□□ 1.47
PTPRU-203ENST00000415600 FDX1P10109 184 aa24.24■■□□□ 1.47
PTPRU-203ENST00000415600 TFAP4Q01664 338 aa24.24■■□□□ 1.47
PTPRU-203ENST00000415600 DIS3Q9Y2L1 958 aaKnown RBP24.24■■□□□ 1.47
PTPRU-203ENST00000415600 DNM1LO00429 736 aa24.23■■□□□ 1.47
PTPRU-203ENST00000415600 SEPT4O43236 478 aa24.23■■□□□ 1.47
PTPRU-203ENST00000415600 COL6A1P12109 1028 aa24.23■■□□□ 1.47
PTPRU-203ENST00000415600 MAML3Q96JK9 1138 aa24.23■■□□□ 1.47
PTPRU-203ENST00000415600 NUP88Q99567 741 aaPredicted RBP24.23■■□□□ 1.47
PTPRU-203ENST00000415600 ZNF214Q9UL59 606 aaPredicted RBP24.23■■□□□ 1.47
PTPRU-203ENST00000415600 ISY1Q9ULR0 285 aaKnown RBP24.23■■□□□ 1.47
PTPRU-203ENST00000415600 TSPY2A6NKD2 308 aa24.22■■□□□ 1.47
PTPRU-203ENST00000415600 TRIM6-TRIM34B2RNG4 842 aa24.22■■□□□ 1.47
PTPRU-203ENST00000415600 MFAP1P55081 439 aaKnown RBP24.22■■□□□ 1.47
PTPRU-203ENST00000415600 NUCB1Q02818 461 aa24.22■■□□□ 1.47
PTPRU-203ENST00000415600 SNRNP48Q6IEG0 339 aaKnown RBP24.22■■□□□ 1.47
PTPRU-203ENST00000415600 LNPKQ9C0E8 428 aa24.22■■□□□ 1.47
PTPRU-203ENST00000415600 KBTBD13C9JR72 458 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms