RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FBXO28Q9NVF7 368 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 MYH4Q9Y623 1939 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 STRNO43815 780 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 PRDM1O75626 825 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 LHX8Q68G74 356 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 IFNL3Q8IZI9 196 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 NACAP1Q9BZK3 213 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 MROH8Q9H579 483 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 ZNF287Q9HBT7 754 aa26.65■■□□□ 1.86
MSH6-202ENST00000411819 PATL2C9JE40 543 aaKnown RBP26.64■■□□□ 1.86
MSH6-202ENST00000411819 TMEM132BQ14DG7 1078 aa26.63■■□□□ 1.85
MSH6-202ENST00000411819 ZNF444Q8N0Y2 327 aaPredicted RBP26.63■■□□□ 1.85
MSH6-202ENST00000411819 NAPBQ9H115 298 aa26.63■■□□□ 1.85
MSH6-202ENST00000411819 SLC5A4Q9NY91 659 aa26.63■■□□□ 1.85
MSH6-202ENST00000411819 PCDH10Q9P2E7 1040 aa26.63■■□□□ 1.85
MSH6-202ENST00000411819 PFASO15067 1338 aa26.63■■□□□ 1.85
MSH6-202ENST00000411819 ZMYM1Q5SVZ6 1142 aa26.62■■□□□ 1.85
MSH6-202ENST00000411819 NUP88Q99567 741 aaPredicted RBP26.62■■□□□ 1.85
MSH6-202ENST00000411819 NYAP2Q9P242 653 aa26.62■■□□□ 1.85
MSH6-202ENST00000411819 DDX20Q9UHI6 824 aaKnown RBP26.62■■□□□ 1.85
MSH6-202ENST00000411819 PPP1R9AQ9ULJ8 1098 aa26.62■■□□□ 1.85
MSH6-202ENST00000411819 ZMYND8Q9ULU4 1186 aaPredicted RBP26.62■■□□□ 1.85
MSH6-202ENST00000411819 SLC25A27O95847 323 aa26.61■■□□□ 1.85
MSH6-202ENST00000411819 OLFML2BQ68BL8 750 aa26.61■■□□□ 1.85
MSH6-202ENST00000411819 SALL3Q9BXA9 1300 aa26.61■■□□□ 1.85
MSH6-202ENST00000411819 VWA5AO00534 786 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 MSCO60682 206 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 COBLO75128 1261 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 FCER1AP12319 257 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 ABRAQ8N0Z2 381 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 CLIP2Q9UDT6 1046 aa26.6■■□□□ 1.85
MSH6-202ENST00000411819 ZNFX1Q9P2E3 1918 aaKnown RBP26.6■■□□□ 1.85
MSH6-202ENST00000411819 F5H6K3 240 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 NDUFB10O96000 172 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 CYBAP13498 195 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 KLRC3Q07444 240 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 HDAC1Q13547 482 aaPredicted RBP26.59■■□□□ 1.85
MSH6-202ENST00000411819 TRPV1Q8NER1 839 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 MMP19Q99542 508 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 SLF1Q9BQI6 1058 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 ADAMTS5Q9UNA0 930 aa26.59■■□□□ 1.85
MSH6-202ENST00000411819 SLC3A2P08195 630 aaKnown RBP26.58■■□□□ 1.85
MSH6-202ENST00000411819 COL6A1P12109 1028 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 PDE4BQ07343 736 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 CCDC129Q6ZRS4 1044 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 RIOX2Q8IUF8 465 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 CEP95Q96GE4 821 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 PRO3102Q9H379 93 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 STAP2Q9UGK3 403 aa26.58■■□□□ 1.85
MSH6-202ENST00000411819 PLXNA1Q9UIW2 1896 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 IGKV6D-41A0A0C4DH26 115 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 TSPY3P0CV98 308 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 TSPY8P0CW00 308 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 SYN1P17600 705 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 STAT3P40763 770 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 PPARAQ07869 468 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 KCTD2Q14681 263 aa26.57■■□□□ 1.84
MSH6-202ENST00000411819 LRRC47Q8N1G4 583 aaKnown RBP26.57■■□□□ 1.84
MSH6-202ENST00000411819 ZNF214Q9UL59 606 aaPredicted RBP26.57■■□□□ 1.84
MSH6-202ENST00000411819 EVI5LQ96CN4 794 aa26.56■■□□□ 1.84
MSH6-202ENST00000411819 MAML3Q96JK9 1138 aa26.56■■□□□ 1.84
MSH6-202ENST00000411819 PLIN4Q96Q06 1357 aa26.56■■□□□ 1.84
MSH6-202ENST00000411819 TTLL1O95922 423 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 IGHA2P01877 340 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 COPB2P35606 906 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 PDE1AP54750 535 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 FAM47AQ5JRC9 791 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 ANO1Q5XXA6 986 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 REPS2Q8NFH8 660 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 MTMR4Q9NYA4 1195 aa26.55■■□□□ 1.84
MSH6-202ENST00000411819 ISY1Q9ULR0 285 aaKnown RBP26.55■■□□□ 1.84
MSH6-202ENST00000411819 CTDP1Q9Y5B0 961 aaPredicted RBP26.55■■□□□ 1.84
MSH6-202ENST00000411819 RANBP2P49792 3224 aaKnown RBP26.54■■□□□ 1.84
MSH6-202ENST00000411819 PGK2P07205 417 aa26.54■■□□□ 1.84
MSH6-202ENST00000411819 LRRC26Q2I0M4 334 aa26.54■■□□□ 1.84
MSH6-202ENST00000411819 TEX13BQ9BXU2 312 aa26.54■■□□□ 1.84
MSH6-202ENST00000411819 SENP6Q9GZR1 1112 aaPredicted RBP26.54■■□□□ 1.84
MSH6-202ENST00000411819 MYCNP04198 464 aaPredicted RBP26.53■■□□□ 1.84
MSH6-202ENST00000411819 SLC4A3P48751 1232 aa26.53■■□□□ 1.84
MSH6-202ENST00000411819 TFAP4Q01664 338 aa26.53■■□□□ 1.84
MSH6-202ENST00000411819 PRAMEF19Q5SWL8 479 aa26.53■■□□□ 1.84
MSH6-202ENST00000411819 SNRNP48Q6IEG0 339 aaKnown RBP26.53■■□□□ 1.84
MSH6-202ENST00000411819 PRPF38AQ8NAV1 312 aaKnown RBP26.53■■□□□ 1.84
MSH6-202ENST00000411819 NEDD1Q8NHV4 660 aa26.53■■□□□ 1.84
MSH6-202ENST00000411819 KIFC2Q96AC6 838 aa26.53■■□□□ 1.84
MSH6-202ENST00000411819 A0A1W2PPC1 479 aa26.52■■□□□ 1.84
MSH6-202ENST00000411819 DNM1LO00429 736 aa26.52■■□□□ 1.84
MSH6-202ENST00000411819 SEPT4O43236 478 aa26.52■■□□□ 1.84
MSH6-202ENST00000411819 MKL1Q969V6 931 aa26.52■■□□□ 1.84
MSH6-202ENST00000411819 LNPKQ9C0E8 428 aa26.52■■□□□ 1.84
MSH6-202ENST00000411819 CTDSPL2Q05D32 466 aa26.51■■□□□ 1.83
MSH6-202ENST00000411819 GJC2Q5T442 439 aaPredicted RBP26.51■■□□□ 1.83
MSH6-202ENST00000411819 CPXCR1Q8N123 301 aa26.51■■□□□ 1.83
MSH6-202ENST00000411819 GMCL1P1Q8NEA9 526 aa26.51■■□□□ 1.83
MSH6-202ENST00000411819 GDF15Q99988 308 aa26.51■■□□□ 1.83
MSH6-202ENST00000411819 SYNPO2Q9UMS6 1093 aa26.51■■□□□ 1.83
MSH6-202ENST00000411819 KBTBD13C9JR72 458 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 FOXP2O15409 715 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 ZBED4O75132 1171 aa26.5■■□□□ 1.83
MSH6-202ENST00000411819 ATN1P54259 1190 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms