RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 NOSTRINQ8IVI9 506 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNX13-202ENST00000409604 LLPHQ9BRT6 129 aaKnown RBP12.91□□□□□ -0.34
SNX13-202ENST00000409604 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
SNX13-202ENST00000409604 BRD1O95696 1058 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
SNX13-202ENST00000409604 PTGDRQ13258 359 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
SNX13-202ENST00000409604 CALCRLQ16602 461 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
SNX13-202ENST00000409604 HACL1Q9UJ83 578 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 HOOK2Q96ED9 719 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 KIF2CQ99661 725 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
SNX13-202ENST00000409604 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.35
SNX13-202ENST00000409604 ASNSP08243 561 aa12.9□□□□□ -0.35
SNX13-202ENST00000409604 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.35
SNX13-202ENST00000409604 TRMT1Q9NXH9 659 aaKnown RBP12.9□□□□□ -0.35
SNX13-202ENST00000409604 DACH1Q9UI36 760 aa12.9□□□□□ -0.35
SNX13-202ENST00000409604 LTN1O94822 1766 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 STAT2P52630 851 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 ARID5AQ03989 594 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 Q3C1V9 767 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 FBXO28Q9NVF7 368 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 PTPN21Q16825 1174 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 SEPT14Q6ZU15 432 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 NELFCDQ8IXH7 590 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
SNX13-202ENST00000409604 TRMT44Q8IYL2 757 aaKnown RBP12.89□□□□□ -0.35
SNX13-202ENST00000409604 GRAMD1CQ8IYS0 662 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 GLG1Q92896 1179 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 AMNQ9BXJ7 453 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 CCDC169A6NNP5 214 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 NR1I2O75469 434 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 MTMR2Q13614 643 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
SNX13-202ENST00000409604 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 TMEM260Q9NX78 707 aa12.89□□□□□ -0.35
SNX13-202ENST00000409604 IGBP1P78318 339 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
SNX13-202ENST00000409604 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 SH2D3AQ9BRG2 576 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 MEIS1O00470 390 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 NEMFO60524 1076 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 INPP5BP32019 993 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 ECE1P42892 770 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 TBCKQ8TEA7 893 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 ZNF202O95125 648 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 TNNT1P13805 278 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 LMNB1P20700 586 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 TYRO3Q06418 890 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
SNX13-202ENST00000409604 TMC6Q7Z403 805 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
SNX13-202ENST00000409604 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 IREB2P48200 963 aaKnown RBP12.87□□□□□ -0.35
SNX13-202ENST00000409604 AMPD3Q01432 767 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 ARMC9Q7Z3E5 817 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 SERTAD1Q9UHV2 236 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 ADCY5O95622 1261 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 PNOCQ13519 176 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
SNX13-202ENST00000409604 DPH6Q7L8W6 267 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 TMEM63CQ9P1W3 806 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 MON2Q7Z3U7 1717 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
SNX13-202ENST00000409604 N4BP3O15049 544 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 GAS7O60861 476 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
SNX13-202ENST00000409604 ANTXR2P58335 489 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 TRAF1Q13077 416 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 SYCP1Q15431 976 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 CCDC125Q86Z20 511 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 GJA10Q969M2 543 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 SLIT3O75094 1523 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 FAM13AO94988 1023 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
SNX13-202ENST00000409604 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms