RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 OTOP1Q7RTM1 612 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 CTU1Q7Z7A3 348 aaKnown RBP18.71■□□□□ 0.59
GDPD3-202ENST00000406256 DGKHQ86XP1 1220 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 REPS2Q8NFH8 660 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 ATG4CQ96DT6 458 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 TTC14Q96N46 770 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 ZSCAN10Q96SZ4 725 aaPredicted RBP18.71■□□□□ 0.59
GDPD3-202ENST00000406256 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 TNKSO95271 1327 aa18.71■□□□□ 0.59
GDPD3-202ENST00000406256 SNHG28P0DPA3 235 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 COG2Q14746 738 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 TSGA10IPQ3SY00 556 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 RABGAP1Q9Y3P9 1069 aa18.7■□□□□ 0.58
GDPD3-202ENST00000406256 FLOT1O75955 427 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 MCCP23508 829 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 HSPA4P34932 840 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 ERVK-24P63145 666 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 ADCK5Q3MIX3 580 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 IQCA1Q86XH1 822 aa18.69■□□□□ 0.58
GDPD3-202ENST00000406256 RAD21O60216 631 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 BMP3P12645 472 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
GDPD3-202ENST00000406256 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 PAGR1Q9BTK6 254 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 USP26Q9BXU7 913 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 PORCNQ9H237 461 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 TRIM17Q9Y577 477 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 ZNF236Q9UL36 1845 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
GDPD3-202ENST00000406256 MYH6P13533 1939 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 EPB41L2O43491 1005 aaKnown RBP18.68■□□□□ 0.58
GDPD3-202ENST00000406256 ECM2O94769 699 aaPredicted RBP18.68■□□□□ 0.58
GDPD3-202ENST00000406256 PDHBP11177 359 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 PSMC4P43686 418 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 TRDNQ13061 729 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 MCOLN1Q9GZU1 580 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 EFCC1Q9HA90 598 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
GDPD3-202ENST00000406256 HOXC10Q9NYD6 342 aa18.68■□□□□ 0.58
GDPD3-202ENST00000406256 VWA5AO00534 786 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 PLA2G6O60733 806 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 REC8O95072 547 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 TMEM132BQ14DG7 1078 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 KCTD1Q719H9 257 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
GDPD3-202ENST00000406256 PNMA1Q8ND90 353 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 GPRC5AQ8NFJ5 357 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 DCAF4Q8WV16 495 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 SLF1Q9BQI6 1058 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
GDPD3-202ENST00000406256 SNX14Q9Y5W7 946 aa18.67■□□□□ 0.58
GDPD3-202ENST00000406256 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 SEC24BO95487 1268 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 SLC1A4P43007 532 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 C8orf34Q49A92 452 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 TTBK2Q6IQ55 1244 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 UBAC1Q9BSL1 405 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 FEM1BQ9UK73 627 aa18.66■□□□□ 0.58
GDPD3-202ENST00000406256 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 RNF20Q5VTR2 975 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 BTNL9Q6UXG8 535 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 MOV10L1Q9BXT6 1211 aaKnown RBP18.65■□□□□ 0.58
GDPD3-202ENST00000406256 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 GABRQQ9UN88 632 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
GDPD3-202ENST00000406256 LCTP09848 1927 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 SH2B2O14492 632 aaPredicted RBP18.64■□□□□ 0.57
GDPD3-202ENST00000406256 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
GDPD3-202ENST00000406256 PRC1O43663 620 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 FCGRTP55899 365 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 EXOSC10Q01780 885 aaKnown RBP18.64■□□□□ 0.57
GDPD3-202ENST00000406256 KIF22Q14807 665 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 IFIT1BQ5T764 474 aaKnown RBP18.64■□□□□ 0.57
GDPD3-202ENST00000406256 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
GDPD3-202ENST00000406256 MTA3Q9BTC8 594 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 SPATC1LQ9H0A9 340 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 SLC38A10Q9HBR0 1119 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 SRRDQ9UH36 339 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 GJD2Q9UKL4 321 aa18.64■□□□□ 0.57
GDPD3-202ENST00000406256 ZNF536O15090 1300 aa18.63■□□□□ 0.57
GDPD3-202ENST00000406256 FRMPD2Q68DX3 1309 aaPredicted RBP18.63■□□□□ 0.57
GDPD3-202ENST00000406256 GNRH1P01148 92 aa18.63■□□□□ 0.57
GDPD3-202ENST00000406256 MCM5P33992 734 aa18.63■□□□□ 0.57
GDPD3-202ENST00000406256 STAT2P52630 851 aa18.63■□□□□ 0.57
GDPD3-202ENST00000406256 PRKCZQ05513 592 aa18.63■□□□□ 0.57
GDPD3-202ENST00000406256 FBXO46Q6PJ61 603 aaPredicted RBP18.63■□□□□ 0.57
GDPD3-202ENST00000406256 SAMD1Q6SPF0 538 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms