RNA–Protein interactions for RNA: ENST00000405506.2

XRCC6-204, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 5 BASIC

Gene XRCC6, Length 1,958 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-204ENST00000405506 PDCL2Q8N4E4 241 aa11.92□□□□□ -0.5
XRCC6-204ENST00000405506 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
XRCC6-204ENST00000405506 CLIC6Q96NY7 704 aa11.92□□□□□ -0.5
XRCC6-204ENST00000405506 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
XRCC6-204ENST00000405506 FBXO2Q9UK22 296 aaPredicted RBP11.92□□□□□ -0.5
XRCC6-204ENST00000405506 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
XRCC6-204ENST00000405506 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 BTBD18B2RXH4 712 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 BIN1O00499 593 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 FUT2Q10981 343 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 SAFBQ15424 915 aaKnown RBP eCLIP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 DIS3L2Q8IYB7 885 aaKnown RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 SPATA20Q8TB22 786 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 TEKT1Q969V4 418 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
XRCC6-204ENST00000405506 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 BAZ2BQ9UIF8 2168 aaKnown RBP11.91□□□□□ -0.5
XRCC6-204ENST00000405506 SLURP2P0DP57 97 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 NFIAQ12857 509 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 PNOCQ13519 176 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
XRCC6-204ENST00000405506 ZFPM1Q8IX07 1006 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 AMOTL1Q8IY63 956 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 SHISA4Q96DD7 197 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 FEZ1Q99689 392 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 L2HGDHQ9H9P8 463 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.5
XRCC6-204ENST00000405506 PCDHA5Q9Y5H7 936 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 BMP6P22004 513 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 CACNB3P54284 484 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 GABPAQ06546 454 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 KANK3Q6NY19 840 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 TMC6Q7Z403 805 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 CATIPQ7Z7H3 387 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 PSMD1Q99460 953 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
XRCC6-204ENST00000405506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
XRCC6-204ENST00000405506 PRPF3O43395 683 aaKnown RBP11.89□□□□□ -0.51
XRCC6-204ENST00000405506 DDAH1O94760 285 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 SMC2O95347 1197 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 SFPQP23246 707 aaKnown RBP eCLIP11.89□□□□□ -0.51
XRCC6-204ENST00000405506 MORC3Q14149 939 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 FCHSD1Q86WN1 690 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 RTKN2Q8IZC4 609 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 CNNM3Q8NE01 707 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
XRCC6-204ENST00000405506 HOOK1Q9UJC3 728 aaKnown RBP11.89□□□□□ -0.51
XRCC6-204ENST00000405506 GREB1LQ9C091 1923 aaPredicted RBP11.89□□□□□ -0.51
XRCC6-204ENST00000405506 hCG_1642624A0A1W2PR95 340 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TSPY3P0CV98 308 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TSPY8P0CW00 308 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ZNF18P17022 549 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 UBASH3AP57075 661 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TBX2Q13207 712 aaPredicted RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 PKN1Q16512 942 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ZNF444Q8N0Y2 327 aaPredicted RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ENOX1Q8TC92 643 aaKnown RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 CGNQ9P2M7 1197 aaKnown RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 CCP110O43303 1012 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 RAD17O75943 681 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TGFB2P61812 414 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 TMTC3Q6ZXV5 915 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 RASGRP2Q7LDG7 609 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 DGKHQ86XP1 1220 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
XRCC6-204ENST00000405506 DPF2Q92785 391 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 MAN1B1Q9UKM7 699 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 KCNJ14Q9UNX9 436 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 CNTNAP5Q8WYK1 1306 aa11.88□□□□□ -0.51
XRCC6-204ENST00000405506 ACTN4O43707 911 aaKnown RBP11.87□□□□□ -0.51
XRCC6-204ENST00000405506 NRDCO43847 1150 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
XRCC6-204ENST00000405506 HDLBPQ00341 1268 aaKnown RBP11.87□□□□□ -0.51
XRCC6-204ENST00000405506 POSTNQ15063 836 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 LARGE2Q8N3Y3 721 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
XRCC6-204ENST00000405506 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms