RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TRIM60Q495X7 471 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 MMP19Q99542 508 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 KANSL2Q9H9L4 492 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
PRAME-204ENST00000403441 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
PRAME-204ENST00000403441 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 USP17L21D6R901 530 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 RAD21O60216 631 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 RARBP10826 455 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 COPB2P35606 906 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 ADCYAP1R1P41586 468 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 KCTD2Q14681 263 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 TMEM132BQ14DG7 1078 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 SNX17Q15036 470 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 LRRC41Q15345 812 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 ZNF697Q5TEC3 545 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 C12orf60Q5U649 245 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 ZSCAN25Q6NSZ9 544 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 C16orf86Q6ZW13 317 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 HAUS7Q99871 368 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 MYH7P12883 1935 aa14.82□□□□□ -0.04
PRAME-204ENST00000403441 PARP14Q460N5 1801 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 CYP2D7A0A087X1C5 515 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 EEF2P13639 858 aaKnown RBP14.81□□□□□ -0.04
PRAME-204ENST00000403441 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 FERMT2Q96AC1 680 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 XPNPEP3Q9NQH7 507 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 PCDHB15Q9Y5E8 787 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 SLC4A4Q9Y6R1 1079 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 UNC80Q8N2C7 3258 aa14.81□□□□□ -0.04
PRAME-204ENST00000403441 PGK2P07205 417 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 SLFNL1Q499Z3 407 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 C1orf53Q5VUE5 145 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 RNF180Q86T96 592 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 RIOX2Q8IUF8 465 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 GUCD1Q96NT3 240 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 PDLIM7Q9NR12 457 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
PRAME-204ENST00000403441 PPP1R9AQ9ULJ8 1098 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 ADAMTS5Q9UNA0 930 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 PHF24Q9UPV7 400 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 ROBO3Q96MS0 1386 aa14.8□□□□□ -0.04
PRAME-204ENST00000403441 VWA5AO00534 786 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 COL11A1P12107 1806 aaPredicted RBP14.79□□□□□ -0.04
PRAME-204ENST00000403441 STAT3P40763 770 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 AAMPQ13685 434 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 SHHQ15465 462 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRAME-204ENST00000403441 BADQ92934 168 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 FBXO28Q9NVF7 368 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 CNPY2Q9Y2B0 182 aa14.79□□□□□ -0.04
PRAME-204ENST00000403441 DIS3Q9Y2L1 958 aaKnown RBP14.79□□□□□ -0.04
PRAME-204ENST00000403441 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
PRAME-204ENST00000403441 FAM83BQ5T0W9 1011 aa14.78□□□□□ -0.04
PRAME-204ENST00000403441 CTR9Q6PD62 1173 aa14.78□□□□□ -0.04
PRAME-204ENST00000403441 LRRCC1Q9C099 1032 aa14.78□□□□□ -0.04
PRAME-204ENST00000403441 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
PRAME-204ENST00000403441 SMIM22K7EJ46 135 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 PGK1P00558 417 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 AKR1A1P14550 325 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 SMAD3P84022 425 aaKnown RBP14.77□□□□□ -0.05
PRAME-204ENST00000403441 TLE2Q04725 743 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 ZNF792Q3KQV3 632 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 SLF1Q9BQI6 1058 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 TEX13BQ9BXU2 312 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 TACC3Q9Y6A5 838 aa14.77□□□□□ -0.05
PRAME-204ENST00000403441 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 PLXNA1Q9UIW2 1896 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 TRIM43BA6NCK2 446 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 CHGBP05060 677 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 CLTBP09497 229 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 SH3RF1Q7Z6J0 888 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 MSL3Q8N5Y2 521 aaKnown RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 TRIM43Q96BQ3 446 aaPredicted RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 MKNK2Q9HBH9 465 aa14.76□□□□□ -0.05
PRAME-204ENST00000403441 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
PRAME-204ENST00000403441 PQBP1O60828 265 aaKnown RBP14.75□□□□□ -0.05
PRAME-204ENST00000403441 TAL1P17542 331 aaPredicted RBP14.75□□□□□ -0.05
PRAME-204ENST00000403441 HDAC1Q13547 482 aaPredicted RBP14.75□□□□□ -0.05
PRAME-204ENST00000403441 SBK1Q52WX2 424 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 SNRNP48Q6IEG0 339 aaKnown RBP14.75□□□□□ -0.05
PRAME-204ENST00000403441 GIMAP6Q6P9H5 292 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 REPS2Q8NFH8 660 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 NUP133Q8WUM0 1156 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 DDX11Q96FC9 970 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 GPATCH3Q96I76 525 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 RNPC3Q96LT9 517 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms