RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 LIG1P18858 919 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 ME1P48163 572 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 JAG1P78504 1218 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 MAP3K10Q02779 954 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 ZNF543Q08ER8 600 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 SLC39A14Q15043 492 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 SF3A1Q15459 793 aaKnown RBP15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 NPY5RQ15761 445 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 CCDC183Q5T5S1 534 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 UBA5Q9GZZ9 404 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 VAT1LQ9HCJ6 419 aa15.31■□□□□ 0.04
CEACAM1-206ENST00000403136 FRMPD2Q68DX3 1309 aaPredicted RBP15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 H7C1D1 291 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 TOB1P50616 345 aaPredicted RBP15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 ICA1Q05084 483 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 RASA3Q14644 834 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 TBC1D10BQ4KMP7 808 aaPredicted RBP15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 CDAN1Q8IWY9 1227 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 ISY1Q9ULR0 285 aaKnown RBP15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
CEACAM1-206ENST00000403136 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 CALML3P27482 149 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 GPATCH4Q5T3I0 446 aaKnown RBP15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 ADALQ6DHV7 355 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 FAM177A1Q8N128 213 aaPredicted RBP15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 GPCPD1Q9NPB8 672 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 BARHL2Q9NY43 387 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 SYCE3A1L190 88 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 PTPAQ15257 358 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 WWC2Q6AWC2 1192 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 GPC2Q8N158 579 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 TNFRSF25Q93038 417 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 PIGSQ96S52 555 aa15.29■□□□□ 0.04
CEACAM1-206ENST00000403136 STXBP3O00186 592 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 PPP6R2O75170 966 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 KIF4BQ2VIQ3 1234 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 SLFN13Q68D06 897 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 TYW1BQ6NUM6 668 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 HEATR3Q7Z4Q2 680 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 CCAR1Q8IX12 1150 aaKnown RBP15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 SEC63Q9UGP8 760 aaKnown RBP15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 MYH8P13535 1937 aa15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 GREB1LQ9C091 1923 aaPredicted RBP15.28■□□□□ 0.04
CEACAM1-206ENST00000403136 MYH6P13533 1939 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 F5H6K3 240 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 KLRC3Q07444 240 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 EARS2Q5JPH6 523 aaKnown RBP15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 GALNT17Q6IS24 598 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 HOMER1Q86YM7 354 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 BLIDQ8IZY5 108 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 JMYQ8N9B5 988 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 CCDC148Q8NFR7 591 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 TEPSINQ96N21 525 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 DACT1Q9NYF0 836 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 GPRC5DQ9NZD1 345 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 SCAF8Q9UPN6 1271 aaKnown RBP15.27■□□□□ 0.04
CEACAM1-206ENST00000403136 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 SLC1A4P43007 532 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 KCTD1Q719H9 257 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 ADGRF4Q8IZF3 695 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 ASTN2O75129 1339 aaPredicted RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 A0A1W2PRG0 241 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 RAD21O60216 631 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 NR1I2O75469 434 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 CAP2P40123 477 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 AXDND1Q5T1B0 1012 aaPredicted RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 DAGLBQ8NCG7 672 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 CCDC12Q8WUD4 166 aaPredicted RBP15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 ZMYND12Q9H0C1 365 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 DEFB129Q9H1M3 183 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 JMJD4Q9H9V9 463 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 ZBTB21Q9ULJ3 1066 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 PCDHB6Q9Y5E3 794 aa15.26■□□□□ 0.03
CEACAM1-206ENST00000403136 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
CEACAM1-206ENST00000403136 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms