RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
SCFD2-202ENST00000401642 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
SCFD2-202ENST00000401642 UBA7P41226 1012 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 SARSP49591 514 aaKnown RBP12.55□□□□□ -0.4
SCFD2-202ENST00000401642 FXR1P51114 621 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCFD2-202ENST00000401642 CLCN6P51797 869 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 ZNF569Q5MCW4 686 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 RAD9BQ6WBX8 426 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 FAM196AQ6ZSG2 479 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 BLIDQ8IZY5 108 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 NELFBQ8WX92 580 aa12.55□□□□□ -0.4
SCFD2-202ENST00000401642 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
SCFD2-202ENST00000401642 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 PAPPAQ13219 1627 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 UFL1O94874 794 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 RCSD1Q6JBY9 416 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 MTRQ99707 1265 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 MYH3P11055 1940 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
SCFD2-202ENST00000401642 CALM1P0DP23 149 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 CALM2P0DP24 149 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 CALM3P0DP25 149 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 ZNF18P17022 549 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 KIF5BP33176 963 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 SPATA1Q5VX52 437 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 TMEM139Q8IV31 216 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
SCFD2-202ENST00000401642 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
SCFD2-202ENST00000401642 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
SCFD2-202ENST00000401642 FAM237AA0A1B0GTK4 181 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 NAPAP54920 295 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 UBXN1Q04323 297 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 NR1I3Q14994 352 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 GJA10Q969M2 543 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 TXLNAP40222 546 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 KRT31Q15323 416 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 KIF20AO95235 890 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
SCFD2-202ENST00000401642 MXD3Q9BW11 206 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 NARFQ9UHQ1 456 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
SCFD2-202ENST00000401642 KLRF2D3W0D1 207 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 DDAH1O94760 285 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 PRCPP42785 496 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 ATP2C1P98194 919 aaPredicted RBP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 TEX11Q8IYF3 940 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 KRT222Q8N1A0 295 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 NYXQ9GZU5 481 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 CYTH3O43739 400 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.41
SCFD2-202ENST00000401642 CCDC175P0C221 793 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 TECP42680 631 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 BTDP43251 543 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 TRIM47Q96LD4 638 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 TMEM47Q9BQJ4 181 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 GPCPD1Q9NPB8 672 aa12.52□□□□□ -0.41
SCFD2-202ENST00000401642 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 FAM170AA1A519 330 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 CCP110O43303 1012 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 TPM1P09493 284 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 KRT9P35527 623 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
SCFD2-202ENST00000401642 PAK1Q13153 545 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
SCFD2-202ENST00000401642 TMCO3Q6UWJ1 677 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 FEZ1Q99689 392 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 RHOXF2Q9BQY4 288 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 GUCA1BQ9UMX6 200 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 STX10O60499 249 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 TXKP42681 527 aa12.51□□□□□ -0.41
SCFD2-202ENST00000401642 GYS2P54840 703 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms