RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 ZNF174Q15697 407 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 SH3RF1Q7Z6J0 888 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 SPZ1Q9BXG8 430 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 ADAMTSL1Q8N6G6 1762 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 GREB1LQ9C091 1923 aaPredicted RBP17.95■□□□□ 0.46
CDC42-203ENST00000400259 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 A0A087X0B3 334 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 CYTH3O43739 400 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 FANCCQ00597 558 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 PTGDRQ13258 359 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 CCDC148Q8NFR7 591 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
CDC42-203ENST00000400259 EPSTI1Q96J88 318 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 DACH1Q9UI36 760 aa17.95■□□□□ 0.46
CDC42-203ENST00000400259 SMARCA1P28370 1054 aa17.94■□□□□ 0.46
CDC42-203ENST00000400259 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
CDC42-203ENST00000400259 PDE6BP35913 854 aa17.94■□□□□ 0.46
CDC42-203ENST00000400259 ARL6IP4Q66PJ3 421 aaKnown RBP17.94■□□□□ 0.46
CDC42-203ENST00000400259 STX8Q9UNK0 236 aa17.94■□□□□ 0.46
CDC42-203ENST00000400259 ADAMTS3O15072 1205 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 SMC2O95347 1197 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
CDC42-203ENST00000400259 PDILTQ8N807 584 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 TOP1P11387 765 aaKnown RBP17.93■□□□□ 0.46
CDC42-203ENST00000400259 CCZ1BP86790 482 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 CCZ1P86791 482 aaPredicted RBP17.93■□□□□ 0.46
CDC42-203ENST00000400259 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 FILIP1Q7Z7B0 1213 aa17.93■□□□□ 0.46
CDC42-203ENST00000400259 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.462e-6■■□□□ 13.7
CDC42-203ENST00000400259 PYM1Q9BRP8 204 aaKnown RBP17.93■□□□□ 0.46
CDC42-203ENST00000400259 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
CDC42-203ENST00000400259 STXBP3O00186 592 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 RIMBP2O15034 1052 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 GABPAQ06546 454 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 TYW1BQ6NUM6 668 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 CERS5Q8N5B7 392 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 TSC1Q92574 1164 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 MASTLQ96GX5 879 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 KCND1Q9NSA2 647 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 CBFA2T2O43439 604 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 ARID5BQ14865 1188 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 C4orf32Q8N8J7 132 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 CCDC150Q8NCX0 1101 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 MYRIPQ8NFW9 859 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 ENOX1Q8TC92 643 aaKnown RBP17.92■□□□□ 0.46
CDC42-203ENST00000400259 DHX58Q96C10 678 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 MYO3BQ8WXR4 1341 aa17.92■□□□□ 0.46
CDC42-203ENST00000400259 KLRF2D3W0D1 207 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
CDC42-203ENST00000400259 GRAMD1CQ8IYS0 662 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 CEP95Q96GE4 821 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 PAGE5Q96GU1 130 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 VWA3AA6NCI4 1184 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 PARP1P09874 1014 aaKnown RBP17.91■□□□□ 0.46
CDC42-203ENST00000400259 E2F4Q16254 413 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
CDC42-203ENST00000400259 PARP3Q9Y6F1 533 aa17.91■□□□□ 0.46
CDC42-203ENST00000400259 MYH4Q9Y623 1939 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 APBA3O96018 575 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 MMP10P09238 476 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 SKILP12757 684 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 ERCC5P28715 1186 aaPredicted RBP17.9■□□□□ 0.46
CDC42-203ENST00000400259 MCM7P33993 719 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 IL17AQ16552 155 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 GSDMAQ96QA5 445 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 PCDHA6Q9UN73 950 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 PCDHA8Q9Y5H6 950 aa17.9■□□□□ 0.46
CDC42-203ENST00000400259 DYNC1I1O14576 645 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 LONP1P36776 959 aaKnown RBP17.89■□□□□ 0.46
CDC42-203ENST00000400259 DPYDQ12882 1025 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 HHIPL2Q6UWX4 724 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 TMC6Q7Z403 805 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 ZMYND12Q9H0C1 365 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 FANCLQ9NW38 375 aa17.89■□□□□ 0.46
CDC42-203ENST00000400259 IGKV6D-41A0A0C4DH26 115 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 CCDC194A0A1B0GVG4 234 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 ZNF18P17022 549 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.452e-7■■■■■ 32
CDC42-203ENST00000400259 UBASH3AP57075 661 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 HEATR3Q7Z4Q2 680 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 CCDC12Q8WUD4 166 aaPredicted RBP17.89■□□□□ 0.45
CDC42-203ENST00000400259 TTF2Q9UNY4 1162 aaKnown RBP17.89■□□□□ 0.45
CDC42-203ENST00000400259 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
CDC42-203ENST00000400259 FMR1Q06787 632 aaKnown RBP eCLIP17.88■□□□□ 0.452e-14■■■■■ 50.5
CDC42-203ENST00000400259 IQUBQ8NA54 791 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 SWAP70Q9UH65 585 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 SLX4Q8IY92 1834 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 SCN9AQ15858 1988 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 SERPINC1P01008 464 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 KCNJ6P48051 423 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 ARMCX5Q6P1M9 558 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 PDXDC2PQ6P474 469 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 TMX4Q9H1E5 349 aaPredicted RBP17.88■□□□□ 0.45
CDC42-203ENST00000400259 DDX4Q9NQI0 724 aaKnown RBP17.88■□□□□ 0.45
CDC42-203ENST00000400259 MTMR4Q9NYA4 1195 aa17.88■□□□□ 0.45
CDC42-203ENST00000400259 LAD1O00515 517 aa17.87■□□□□ 0.45
CDC42-203ENST00000400259 GOLGA8HP0CJ92 632 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms