RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 NUDT12Q9BQG2 462 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 RNF208Q9H0X6 261 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 UNC93B1Q9H1C4 597 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 INCENPQ9NQS7 918 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 FBXO28Q9NVF7 368 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 NYAP2Q9P242 653 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
USP16-202ENST00000399973 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 ZMYM6O95789 1325 aa9.98□□□□□ -0.81
USP16-202ENST00000399973 TNRC18O15417 2968 aaPredicted RBP9.98□□□□□ -0.81
USP16-202ENST00000399973 IGKV6D-41A0A0C4DH26 115 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 TTLL1O95922 423 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 NDUFB10O96000 172 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 FGAP02671 866 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 HMGCRP04035 888 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 ZKSCAN1P17029 563 aaPredicted RBP9.97□□□□□ -0.81
USP16-202ENST00000399973 RGS2P41220 211 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 LBX2Q6XYB7 198 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 TICAM2Q86XR7 235 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 TBC1D10CQ8IV04 446 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 APBA2Q99767 749 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 MOV10L1Q9BXT6 1211 aaKnown RBP9.97□□□□□ -0.81
USP16-202ENST00000399973 MTMR4Q9NYA4 1195 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 HOXC10Q9NYD6 342 aa9.97□□□□□ -0.81
USP16-202ENST00000399973 PDE4DIPQ5VU43 2346 aa9.96□□□□□ -0.81
USP16-202ENST00000399973 F5H6K3 240 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 NMT2O60551 498 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 KLRC3Q07444 240 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 TRIM32Q13049 653 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 IKQ13123 557 aaPredicted RBP9.96□□□□□ -0.82
USP16-202ENST00000399973 ALX1Q15699 326 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 MB21D1Q8N884 522 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 TRIB2Q92519 343 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 SLF1Q9BQI6 1058 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 SPATC1LQ9H0A9 340 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 ANAPC4Q9UJX5 808 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 PPP1R9AQ9ULJ8 1098 aa9.96□□□□□ -0.82
USP16-202ENST00000399973 CTDP1Q9Y5B0 961 aaPredicted RBP9.96□□□□□ -0.82
USP16-202ENST00000399973 MYH6P13533 1939 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 ZNF213O14771 459 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 ORC4O43929 436 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 NEFLP07196 543 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 ERCC3P19447 782 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 PTPREP23469 700 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 MAP2K5Q13163 448 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 TMEM132BQ14DG7 1078 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 CCL14Q16627 93 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 MFSD6Q6ZSS7 791 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 CENPQQ7L2Z9 268 aaPredicted RBP9.95□□□□□ -0.82
USP16-202ENST00000399973 RASGRP2Q7LDG7 609 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 GMCL1P1Q8NEA9 526 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 SHISA4Q96DD7 197 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 DEFB118Q96PH6 123 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP16-202ENST00000399973 GJD2Q9UKL4 321 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 TACC3Q9Y6A5 838 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 NEDD4P46934 1319 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 RAD50Q92878 1312 aa9.95□□□□□ -0.82
USP16-202ENST00000399973 ALPK3Q96L96 1907 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 SLC15A5A6NIM6 579 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 VWA5AO00534 786 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 GJB1P08034 283 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 BMP3P12645 472 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 PRKAR2AP13861 404 aaKnown RBP9.94□□□□□ -0.82
USP16-202ENST00000399973 GRB14Q14449 540 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 MORN1Q5T089 497 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 AKNAD1Q5T1N1 836 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 SNRNP48Q6IEG0 339 aaKnown RBP9.94□□□□□ -0.82
USP16-202ENST00000399973 SKAP1Q86WV1 359 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 CPXCR1Q8N123 301 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 SHCBP1Q8NEM2 672 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
USP16-202ENST00000399973 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 IL25Q9H293 177 aa9.94□□□□□ -0.82
USP16-202ENST00000399973 RNF41Q9H4P4 317 aaPredicted RBP9.94□□□□□ -0.82
USP16-202ENST00000399973 TMEM232C9JQI7 657 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 MCCP23508 829 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 ADORA2AP29274 412 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 SLC1A4P43007 532 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 GJA8P48165 433 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 STAT2P52630 851 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
USP16-202ENST00000399973 KCTD1Q719H9 257 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 DPP9Q86TI2 863 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 TRMT44Q8IYL2 757 aaKnown RBP9.93□□□□□ -0.82
USP16-202ENST00000399973 STAG1Q8WVM7 1258 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 ESR2Q92731 530 aa9.93□□□□□ -0.82
USP16-202ENST00000399973 CCDC136Q96JN2 1154 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms