RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 IREB2P48200 963 aaKnown RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 MLECQ14165 292 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 MSS51Q4VC12 460 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 TPTE2Q6XPS3 522 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 LRRC69Q6ZNQ3 347 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 AHI1Q8N157 1196 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 JARID2Q92833 1246 aaPredicted RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 CXorf56Q9H5V9 222 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 CRTAC1Q9NQ79 661 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 SMC4Q9NTJ3 1288 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 SYNPO2Q9UMS6 1093 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 DISP1Q96F81 1524 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 FZD9O00144 591 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 ZKSCAN1P17029 563 aaPredicted RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 CYP2C19P33261 490 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 MAP7Q14244 749 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 YOD1Q5VVQ6 348 aaPredicted RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 KIAA1614Q5VZ46 1190 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 TTC1Q99614 292 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 CRB3Q9BUF7 120 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 AP1M1Q9BXS5 423 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 OXCT2Q9BYC2 517 aaPredicted RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 PDGFDQ9GZP0 370 aaPredicted RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 RSAD1Q9HA92 442 aa8.01□□□□□ -1.13
SMCO1-201ENST00000397537 TRMT13Q9NUP7 481 aaKnown RBP8.01□□□□□ -1.13
SMCO1-201ENST00000397537 NEO1Q92859 1461 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 NCOA1Q15788 1441 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 FAM221AA4D161 298 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 PABPN1LA6NDY0 278 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 TLR5O60602 858 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 SNUPNO95149 360 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 MBD4O95243 580 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 NPTXRO95502 500 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 IMPDH2P12268 514 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 IARSP41252 1262 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 GRB10Q13322 594 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 AGAP9Q5VTM2 703 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 TBC1D1Q86TI0 1168 aaPredicted RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 LMNTD2Q8IXW0 634 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 FAM26EQ8N5C1 309 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 CCT6BQ92526 530 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 RPGRQ92834 1020 aaKnown RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 FUBP3Q96I24 572 aaKnown RBP eCLIP8□□□□□ -1.13
SMCO1-201ENST00000397537 KCTD15Q96SI1 283 aaPredicted RBP8□□□□□ -1.13
SMCO1-201ENST00000397537 PHACTR1Q9C0D0 580 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 RRN3Q9NYV6 651 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 RABGEF1Q9UJ41 708 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 PTPN22Q9Y2R2 807 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 AFG3L2Q9Y4W6 797 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 SLC4A7Q9Y6M7 1214 aa8□□□□□ -1.13
SMCO1-201ENST00000397537 TOM1O60784 492 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 PRKD3O94806 890 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 BAIAP3O94812 1187 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 IFIT1P09914 478 aaKnown RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 MYBL2P10244 700 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 NEK4P51957 841 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 NRLP54845 237 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 TTBK2Q6IQ55 1244 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 GATAD2BQ8WXI9 593 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 MRPL4Q9BYD3 311 aaKnown RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 SLC13A1Q9BZW2 595 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF232Q9UNY5 417 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 USP20Q9Y2K6 914 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 BIVM-ERCC5R4GMW8 1640 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 CDK2AP1O14519 115 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 INMTO95050 263 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 CHKAP35790 457 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 UBA7P41226 1012 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 TDO2P48775 406 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 ROR1Q01973 937 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 SFSWAPQ12872 951 aaKnown RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 MPP2Q14168 576 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 ZNF460Q14592 562 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 TEAD4Q15561 434 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 INAVAQ3KP66 663 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 PDE12Q6L8Q7 609 aaKnown RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 GALNT5Q7Z7M9 940 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 MYLK4Q86YV6 388 aaPredicted RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 CCDC47Q96A33 483 aaKnown RBP7.99□□□□□ -1.13
SMCO1-201ENST00000397537 SGCZQ96LD1 299 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 AIFM3Q96NN9 605 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 EHD4Q9H223 541 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 PPP4R2Q9NY27 417 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 TRAK1Q9UPV9 953 aa7.99□□□□□ -1.13
SMCO1-201ENST00000397537 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms