RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
SYNE4-203ENST00000397428 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
SYNE4-203ENST00000397428 CLEC10AQ8IUN9 316 aa14.38□□□□□ -0.11
SYNE4-203ENST00000397428 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
SYNE4-203ENST00000397428 ZBED9Q6R2W3 1325 aa14.38□□□□□ -0.11
SYNE4-203ENST00000397428 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 CHGBP05060 677 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 SHHQ15465 462 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 RIOX2Q8IUF8 465 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 GUCD1Q96NT3 240 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.37□□□□□ -0.11
SYNE4-203ENST00000397428 PRKAG2Q9UGJ0 569 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 COG6Q9Y2V7 657 aa14.37□□□□□ -0.11
SYNE4-203ENST00000397428 VWA5AO00534 786 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 STAT3P40763 770 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 ZNF792Q3KQV3 632 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
SYNE4-203ENST00000397428 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
SYNE4-203ENST00000397428 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 SBK1Q52WX2 424 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 AMOTL1Q8IY63 956 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 BADQ92934 168 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
SYNE4-203ENST00000397428 STRBPQ96SI9 672 aaKnown RBP14.35□□□□□ -0.11
SYNE4-203ENST00000397428 MMP19Q99542 508 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 PUS7LQ9H0K6 701 aaKnown RBP14.35□□□□□ -0.11
SYNE4-203ENST00000397428 ZNF214Q9UL59 606 aaPredicted RBP14.35□□□□□ -0.11
SYNE4-203ENST00000397428 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
SYNE4-203ENST00000397428 BAZ2AQ9UIF9 1905 aaKnown RBP14.35□□□□□ -0.11
SYNE4-203ENST00000397428 SMCHD1A6NHR9 2005 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 PGK2P07205 417 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
SYNE4-203ENST00000397428 TAL1P17542 331 aaPredicted RBP14.34□□□□□ -0.11
SYNE4-203ENST00000397428 TLE2Q04725 743 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
SYNE4-203ENST00000397428 MYH8P13535 1937 aa14.33□□□□□ -0.11
SYNE4-203ENST00000397428 GSG1L2A8MUP6 293 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 COPB2P35606 906 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 KCTD2Q14681 263 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 XPNPEP3Q9NQH7 507 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 PDLIM7Q9NR12 457 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 NYAP2Q9P242 653 aa14.33□□□□□ -0.12
SYNE4-203ENST00000397428 COL11A1P12107 1806 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-203ENST00000397428 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 F5H6K3 240 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 PGK1P00558 417 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 RARBP10826 455 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 RASA1P20936 1047 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 SMAD3P84022 425 aaKnown RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 KLRC3Q07444 240 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 FAM83BQ5T0W9 1011 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 MAMDC4Q6UXC1 1216 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 RNF180Q86T96 592 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 MSL3Q8N5Y2 521 aaKnown RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 PRPF38AQ8NAV1 312 aaKnown RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 MKL1Q969V6 931 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
SYNE4-203ENST00000397428 LRRCC1Q9C099 1032 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
SYNE4-203ENST00000397428 ATP2A1O14983 1001 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-203ENST00000397428 ITGB8P26012 769 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 FAM161BQ96MY7 647 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 CDX2Q99626 313 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-203ENST00000397428 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-203ENST00000397428 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
SYNE4-203ENST00000397428 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-203ENST00000397428 IGKV6D-41A0A0C4DH26 115 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 SMARCA5O60264 1052 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 ADAMTS4O75173 837 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 AKR1A1P14550 325 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 CCSAPQ6IQ19 270 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
SYNE4-203ENST00000397428 KLHDC9Q8NEP7 349 aa14.3□□□□□ -0.12
SYNE4-203ENST00000397428 TOX2Q96NM4 488 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms