RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
CLTA-203ENST00000396603 LBHD1Q9BQE6 289 aaPredicted RBP19.54■□□□□ 0.72
CLTA-203ENST00000396603 PUS7LQ9H0K6 701 aaKnown RBP19.54■□□□□ 0.72
CLTA-203ENST00000396603 PRKAG2Q9UGJ0 569 aa19.54■□□□□ 0.72
CLTA-203ENST00000396603 SYNPO2Q9UMS6 1093 aa19.54■□□□□ 0.72
CLTA-203ENST00000396603 MYH7P12883 1935 aa19.54■□□□□ 0.72
CLTA-203ENST00000396603 TMEM132BQ14DG7 1078 aa19.53■□□□□ 0.72
CLTA-203ENST00000396603 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
CLTA-203ENST00000396603 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
CLTA-203ENST00000396603 ZNF287Q9HBT7 754 aa19.53■□□□□ 0.72
CLTA-203ENST00000396603 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
CLTA-203ENST00000396603 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
CLTA-203ENST00000396603 CYP2D7A0A087X1C5 515 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 VWA5AO00534 786 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 GNAT2P19087 354 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 SLFNL1Q499Z3 407 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 CLEC10AQ8IUN9 316 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 MSL3Q8N5Y2 521 aaKnown RBP19.52■□□□□ 0.72
CLTA-203ENST00000396603 APPBP2Q92624 585 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 NYAP2Q9P242 653 aa19.52■□□□□ 0.72
CLTA-203ENST00000396603 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
CLTA-203ENST00000396603 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
CLTA-203ENST00000396603 RTP1P59025 263 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 KCTD2Q14681 263 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 FAM109BQ6ICB4 259 aaPredicted RBP19.51■□□□□ 0.71
CLTA-203ENST00000396603 SLC39A5Q6ZMH5 540 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 DEFB123Q8N688 67 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 MMP19Q99542 508 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 DCTPP1Q9H773 170 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 ZNF214Q9UL59 606 aaPredicted RBP19.51■□□□□ 0.71
CLTA-203ENST00000396603 STXBP5LQ9Y2K9 1186 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
CLTA-203ENST00000396603 STAT3P40763 770 aa19.5■□□□□ 0.71
CLTA-203ENST00000396603 REPS2Q8NFH8 660 aa19.5■□□□□ 0.71
CLTA-203ENST00000396603 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLTA-203ENST00000396603 COL6A3P12111 3177 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 GSG1L2A8MUP6 293 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 ATP2A1O14983 1001 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 RASA1P20936 1047 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 MDM2Q00987 491 aaPredicted RBP19.49■□□□□ 0.71
CLTA-203ENST00000396603 ZNF792Q3KQV3 632 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 GJC2Q5T442 439 aaPredicted RBP19.49■□□□□ 0.71
CLTA-203ENST00000396603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
CLTA-203ENST00000396603 SLC17A8Q8NDX2 589 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 TINF2Q9BSI4 451 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 TEX13BQ9BXU2 312 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 MKNK2Q9HBH9 465 aa19.49■□□□□ 0.71
CLTA-203ENST00000396603 SMIM22K7EJ46 135 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 RNF113AO15541 343 aaKnown RBP19.48■□□□□ 0.71
CLTA-203ENST00000396603 CHGBP05060 677 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 RARBP10826 455 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 ATN1P54259 1190 aaPredicted RBP19.48■□□□□ 0.71
CLTA-203ENST00000396603 LRRC41Q15345 812 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 C20orf194Q5TEA3 1177 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
CLTA-203ENST00000396603 MKL1Q969V6 931 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 SLF1Q9BQI6 1058 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 MTMR10Q9NXD2 777 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
CLTA-203ENST00000396603 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 SMARCA5O60264 1052 aaPredicted RBP19.47■□□□□ 0.71
CLTA-203ENST00000396603 FAM83BQ5T0W9 1011 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 RNF180Q86T96 592 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 OSBP2Q969R2 916 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 PHF24Q9UPV7 400 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 SYNGAP1Q96PV0 1343 aa19.47■□□□□ 0.71
CLTA-203ENST00000396603 F5H6K3 240 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 AKR1A1P14550 325 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 KLRC3Q07444 240 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 FAM47AQ5JRC9 791 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 ZNF467Q7Z7K2 595 aaPredicted RBP19.46■□□□□ 0.71
CLTA-203ENST00000396603 XPNPEP3Q9NQH7 507 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 CNPY2Q9Y2B0 182 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 ATP11BQ9Y2G3 1177 aa19.46■□□□□ 0.71
CLTA-203ENST00000396603 PLIN4Q96Q06 1357 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 GPAA1O43292 621 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 FDX1P10109 184 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 OAZ1P54368 228 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 MAMDC4Q6UXC1 1216 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 TSEN34Q9BSV6 310 aaKnown RBP19.45■□□□□ 0.7
CLTA-203ENST00000396603 LTBP2Q14767 1821 aa19.45■□□□□ 0.7
CLTA-203ENST00000396603 PATL2C9JE40 543 aaKnown RBP19.44■□□□□ 0.7
CLTA-203ENST00000396603 ERC2O15083 957 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 NDUFB10O96000 172 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 PGK2P07205 417 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 ZNF865P0CJ78 1059 aaPredicted RBP19.44■□□□□ 0.7
CLTA-203ENST00000396603 ADCYAP1R1P41586 468 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 TDO2P48775 406 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 AAMPQ13685 434 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 PRAMEF19Q5SWL8 479 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 ZNF444Q8N0Y2 327 aaPredicted RBP19.44■□□□□ 0.7
CLTA-203ENST00000396603 GMCL1P1Q8NEA9 526 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 NACAP1Q9BZK3 213 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 EPB41L4AQ9HCS5 686 aaPredicted RBP19.44■□□□□ 0.7
CLTA-203ENST00000396603 FBXO40Q9UH90 709 aa19.44■□□□□ 0.7
CLTA-203ENST00000396603 COL11A1P12107 1806 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms