RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 COG5Q9UP83 839 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 ELP1O95163 1332 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 SYNRGQ9UMZ2 1314 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 PRR33A8MZF0 331 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 SMIM22K7EJ46 135 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 AKR1A1P14550 325 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 TFCP2Q12800 502 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 ZNF792Q3KQV3 632 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 SAP30BPQ9UHR5 308 aaKnown RBP16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 MYH1P12882 1939 aa16.84■□□□□ 0.29
VCPKMT-201ENST00000395859 A0A1W2PRG0 241 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 CD4P01730 458 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 RAB3GAP1Q15042 981 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 KCNA10Q16322 511 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 KIAA1755Q5JYT7 1200 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 NAA16Q6N069 864 aaPredicted RBP16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 MICALL1Q8N3F8 863 aa16.83■□□□□ 0.28
VCPKMT-201ENST00000395859 MYOGP15173 224 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 DSG3P32926 999 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 SHMT1P34896 483 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 RABGGTBP53611 331 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 NHLH1Q02575 133 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 PPP2R2DQ66LE6 453 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 LRP2BPQ9P2M1 347 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 PCDHA11Q9Y5I1 949 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 ZNF318Q5VUA4 2279 aa16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
VCPKMT-201ENST00000395859 ARVCFO00192 962 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 FGBP02675 491 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 FCER1AP12319 257 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 CYP2C18P33260 490 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 NCAPG2Q86XI2 1143 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 NOL10Q9BSC4 688 aaKnown RBP16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
VCPKMT-201ENST00000395859 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 RFXAPO00287 272 aa16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 PGK2P07205 417 aa16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 CERKLQ49MI3 558 aaPredicted RBP16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 ADAMTS5Q9UNA0 930 aa16.8■□□□□ 0.28
VCPKMT-201ENST00000395859 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 ADCY6O43306 1168 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 DYNLL1P63167 89 aaKnown RBP16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 SKIV2LQ15477 1246 aaKnown RBP16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 KRT40Q6A162 431 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 SLC43A3Q8NBI5 491 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 SSH1Q8WYL5 1049 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 ATG4CQ96DT6 458 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 GLT1D1Q96MS3 346 aa16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 MTIF3Q9H2K0 278 aaKnown RBP16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 COL11A1P12107 1806 aaPredicted RBP16.79■□□□□ 0.28
VCPKMT-201ENST00000395859 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 CTAGE5O15320 804 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 IGSF3O75054 1194 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 DUSP11O75319 330 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 SLC25A27O95847 323 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 SNAI1O95863 264 aaPredicted RBP16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 ASGR1P07306 291 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 NKX3-2P78367 333 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 GABPAQ06546 454 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 SEPT2Q15019 361 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 OTOP2Q7RTS6 562 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 HLA-CQ95604 372 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 NEUROD6Q96NK8 337 aa16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-201ENST00000395859 CYP2E1P05181 493 aaPredicted RBP16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 MTX1Q13505 466 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 MAMDC4Q6UXC1 1216 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 RIOX2Q8IUF8 465 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 MSL3Q8N5Y2 521 aaKnown RBP16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 MMP19Q99542 508 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 WNT8AQ9H1J5 351 aa16.77■□□□□ 0.28
VCPKMT-201ENST00000395859 GTPBP6O43824 516 aaPredicted RBP16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 UQCRFS1P1P0C7P4 283 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 GJA9P57773 515 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 PLS1Q14651 629 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 SIAH1Q8IUQ4 282 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 FBXL18Q96ME1 805 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 KCNH6Q9H252 994 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
VCPKMT-201ENST00000395859 SLC4A7Q9Y6M7 1214 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms