RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 IL1R1P14778 569 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
RAE1-203ENST00000395841 AFMP43652 599 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 DPYDQ12882 1025 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 ANKRD7Q92527 254 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
RAE1-203ENST00000395841 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 ZNF287Q9HBT7 754 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
RAE1-203ENST00000395841 USP17L3A6NCW0 530 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 USP17L4A6NCW7 530 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 CCP110O43303 1012 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 TRMT44Q8IYL2 757 aaKnown RBP12.82□□□□□ -0.36
RAE1-203ENST00000395841 STAG2Q8N3U4 1231 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 KIF18AQ8NI77 898 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 MED15Q96RN5 788 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 PCDHA4Q9UN74 947 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 TUBB4AP04350 444 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 MMP10P09238 476 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 MCM7P33993 719 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
RAE1-203ENST00000395841 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 MAPKAPK5Q8IW41 473 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
RAE1-203ENST00000395841 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 BBOX1O75936 387 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 RASA1P20936 1047 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 BTDP43251 543 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 TBX2Q13207 712 aaPredicted RBP12.81□□□□□ -0.36
RAE1-203ENST00000395841 E2F4Q16254 413 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 ADAMTS3O15072 1205 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 PLCG2P16885 1265 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 HSP90AA4PQ58FG1 418 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 GALNT17Q6IS24 598 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
RAE1-203ENST00000395841 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 GPKOWQ92917 476 aaPredicted RBP eCLIP12.81□□□□□ -0.36
RAE1-203ENST00000395841 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
RAE1-203ENST00000395841 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
RAE1-203ENST00000395841 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 LONP1P36776 959 aaKnown RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 CUL4BQ13620 913 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 IL17AQ16552 155 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 GLIPR1L2Q4G1C9 344 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 DAGLBQ8NCG7 672 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 CCDC148Q8NFR7 591 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 TMEM47Q9BQJ4 181 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 SAMSN1Q9NSI8 373 aaKnown RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 FAM205AQ6ZU69 1335 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 PALM3A6NDB9 673 aaPredicted RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 M0R2N6 131 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 C16orf86Q6ZW13 317 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 FCHSD1Q86WN1 690 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
RAE1-203ENST00000395841 STX8Q9UNK0 236 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 SYNRGQ9UMZ2 1314 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
RAE1-203ENST00000395841 PLSCR1O15162 318 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
RAE1-203ENST00000395841 CASP1P29466 404 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 SLC35G1Q2M3R5 365 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 WWC2Q6AWC2 1192 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 PDXDC2PQ6P474 469 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 BARHL2Q9NY43 387 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 A0A1B0GTH6 734 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 CYTH3O43739 400 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 CDK8P49336 464 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 NR1I3Q14994 352 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 TYW1BQ6NUM6 668 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 TBC1D22AQ8WUA7 517 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 EYA3Q99504 573 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 POLLQ9UGP5 575 aa12.79□□□□□ -0.36
RAE1-203ENST00000395841 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 STXBP3O00186 592 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 ARHGAP6O43182 974 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 TXLNAP40222 546 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 TBC1D16Q8TBP0 767 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
RAE1-203ENST00000395841 CCDC94Q9BW85 323 aaPredicted RBP12.78□□□□□ -0.36
RAE1-203ENST00000395841 PCDHA6Q9UN73 950 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms