RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NAA16Q6N069 864 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 TBC1D10CQ8IV04 446 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 IFNL3Q8IZI9 196 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 KHSRPQ92945 711 aaKnown RBP eCLIP6.88□□□□□ -1.31
CASC3-202ENST00000394114 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 NAPBQ9H115 298 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SPC25Q9HBM1 224 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 DDX56Q9NY93 547 aaKnown RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 POLLQ9UGP5 575 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 SMC3Q9UQE7 1217 aa6.88□□□□□ -1.31
CASC3-202ENST00000394114 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
CASC3-202ENST00000394114 IRS2Q9Y4H2 1338 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 TCHHQ07283 1943 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 GSG1L2A8MUP6 293 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 BBOX1O75936 387 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CHRNA5P30532 468 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 TDO2P48775 406 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CLCN6P51797 869 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 NUCB2P80303 420 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 MECOMQ03112 1051 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 GRIK5Q16478 980 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 PTPRNQ16849 979 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 SLC4A8Q2Y0W8 1093 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 DHX32Q7L7V1 743 aaKnown RBP6.87□□□□□ -1.31
CASC3-202ENST00000394114 RALYLQ86SE5 291 aaKnown RBP6.87□□□□□ -1.31
CASC3-202ENST00000394114 SP7Q8TDD2 431 aaPredicted RBP6.87□□□□□ -1.31
CASC3-202ENST00000394114 MKL1Q969V6 931 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 AATFQ9NY61 560 aaKnown RBP eCLIP6.87□□□□□ -1.31
CASC3-202ENST00000394114 LEMD3Q9Y2U8 911 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CHD4Q14839 1912 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CCDC88AQ3V6T2 1871 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 MAGEB6P1A0A0J9YX57 407 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 IGFBP4P22692 258 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 HMGB2P26583 209 aaKnown RBP6.87□□□□□ -1.31
CASC3-202ENST00000394114 GJB2P29033 226 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CCT2P78371 535 aaKnown RBP6.87□□□□□ -1.31
CASC3-202ENST00000394114 ZNF804AQ7Z570 1209 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 TBC1D16Q8TBP0 767 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
CASC3-202ENST00000394114 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 KLRG2A4D1S0 409 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 B4E1Z4 1266 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 PRC1O43663 620 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 BAG6P46379 1132 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 EIF1AXP47813 144 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 ANKRD1Q15327 319 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 PLEKHG4Q58EX7 1191 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 MCTP1Q6DN14 999 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 PMM1Q92871 262 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 NSUN4Q96CB9 384 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 ZSCAN31Q96LW9 406 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 GBP4Q96PP9 640 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 NCOA5Q9HCD5 579 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 NEDD4P46934 1319 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 RGPD3A6NKT7 1758 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 RGPD4Q7Z3J3 1758 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 JAK2O60674 1132 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 EIF3JO75822 258 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 BAG4O95429 457 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 NPR1P16066 1061 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 PDE6BP35913 854 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 EXOSC10Q01780 885 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 DZIP1Q86YF9 867 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 NCOA7Q8NI08 942 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 RIOK1Q9BRS2 568 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 NRXN2Q9P2S2 1712 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 VPS37CA5D8V6 355 aaPredicted RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 ESPNB1AK53 854 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 ZBTB7AO95365 584 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 SYT1P21579 422 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 ANTXR2P58335 489 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 TRDNQ13061 729 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 DOK7Q18PE1 504 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 CKAP2LQ8IYA6 745 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 ARMC2Q8NEN0 867 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 TDRD7Q8NHU6 1098 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 RNPC3Q96LT9 517 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
CASC3-202ENST00000394114 CD209Q9NNX6 404 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 ATP6V0A2Q9Y487 856 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 TACC3Q9Y6A5 838 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
CASC3-202ENST00000394114 PNMA6FA0A0J9YX94 578 aa6.85□□□□□ -1.31
CASC3-202ENST00000394114 MCM5P33992 734 aa6.85□□□□□ -1.31
CASC3-202ENST00000394114 SCRN1Q12765 414 aa6.85□□□□□ -1.31
CASC3-202ENST00000394114 R3HDM1Q15032 1099 aaKnown RBP6.85□□□□□ -1.31
CASC3-202ENST00000394114 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
CASC3-202ENST00000394114 CYB5R4Q7L1T6 521 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms