RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 C15orf52Q6ZUT6 534 aaKnown RBP16.72■□□□□ 0.27
CDH16-202ENST00000394055 HEATR3Q7Z4Q2 680 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 BLIDQ8IZY5 108 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 ZNF710Q8N1W2 664 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 CBFA2T2O43439 604 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 CYTH3O43739 400 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 BMP15O95972 392 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 CDK11BP21127 795 aaKnown RBP16.72■□□□□ 0.27
CDH16-202ENST00000394055 CDC25AP30304 524 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 IL17AQ16552 155 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 QTRT2Q9H974 415 aaKnown RBP16.72■□□□□ 0.27
CDH16-202ENST00000394055 SAMSN1Q9NSI8 373 aaKnown RBP16.72■□□□□ 0.27
CDH16-202ENST00000394055 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
CDH16-202ENST00000394055 F8W031 263 aaPredicted RBP16.71■□□□□ 0.27
CDH16-202ENST00000394055 IL1R1P14778 569 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 STX17P56962 302 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
CDH16-202ENST00000394055 CDK8P49336 464 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 WWC2Q6AWC2 1192 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 EYA3Q99504 573 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 DACH1Q9UI36 760 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 FLT1P17948 1338 aa16.71■□□□□ 0.27
CDH16-202ENST00000394055 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
CDH16-202ENST00000394055 TOP1P11387 765 aaKnown RBP16.7■□□□□ 0.26
CDH16-202ENST00000394055 GTF2IP78347 998 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 SPATA20Q8TB22 786 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 BBOX1O75936 387 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
CDH16-202ENST00000394055 CALML3P27482 149 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 PCDHA4Q9UN74 947 aa16.7■□□□□ 0.26
CDH16-202ENST00000394055 ZBTB22O15209 634 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 COBLO75128 1261 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 RHBDL3P58872 404 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 PICALMQ13492 652 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 CCDC34Q96HJ3 373 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 ENOX1Q8TC92 643 aaKnown RBP16.69■□□□□ 0.26
CDH16-202ENST00000394055 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 KLRF2D3W0D1 207 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 DPYDQ12882 1025 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 USP17L2Q6R6M4 530 aa16.69■□□□□ 0.26
CDH16-202ENST00000394055 MORC2Q9Y6X9 1032 aaPredicted RBP16.69■□□□□ 0.26
CDH16-202ENST00000394055 CCDC194A0A1B0GVG4 234 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 ZNF18P17022 549 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 TRAPPC10P48553 1259 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 GNAQP50148 359 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 INF2Q27J81 1249 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 C16orf86Q6ZW13 317 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
CDH16-202ENST00000394055 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 PPP1R13BQ96KQ4 1090 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 MXD3Q9BW11 206 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
CDH16-202ENST00000394055 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
CDH16-202ENST00000394055 NRDCO43847 1150 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
CDH16-202ENST00000394055 PCDHA6Q9UN73 950 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 PAXBP1Q9Y5B6 917 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 PCDHA8Q9Y5H6 950 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 CDK5RAP2Q96SN8 1893 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 PP2D1A8MPX8 630 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 STXBP3O00186 592 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
CDH16-202ENST00000394055 E2F4Q16254 413 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 KRT27Q7Z3Y8 459 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 PROM2Q8N271 834 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 ZNF287Q9HBT7 754 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 DAGLAQ9Y4D2 1042 aa16.67■□□□□ 0.26
CDH16-202ENST00000394055 SYNRGQ9UMZ2 1314 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 KARSQ15046 597 aaKnown RBP16.66■□□□□ 0.26
CDH16-202ENST00000394055 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 CRAMP1Q96RY5 1269 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 MTRQ99707 1265 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 TMEM60Q9H2L4 133 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 SH3GLB2Q9NR46 395 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 DDX60LQ5H9U9 1706 aaKnown RBP16.66■□□□□ 0.26
CDH16-202ENST00000394055 MYO1BO43795 1136 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 PLCG2P16885 1265 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 CUL4BQ13620 913 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 BARHL2Q9NY43 387 aa16.66■□□□□ 0.26
CDH16-202ENST00000394055 ERCC5P28715 1186 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms