RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SAMD1Q6SPF0 538 aaPredicted RBP21.84■■□□□ 1.09
PDLIM7-205ENST00000393551 C7orf61Q8IZ16 206 aa21.84■■□□□ 1.09
PDLIM7-205ENST00000393551 IGKV6D-41A0A0C4DH26 115 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 PATL2C9JE40 543 aaKnown RBP21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 CYBAP13498 195 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 MX1P20591 662 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 FAM83BQ5T0W9 1011 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 DPP9Q86TI2 863 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 NCAPG2Q86XI2 1143 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 IFNL3Q8IZI9 196 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 REPS2Q8NFH8 660 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 MROH8Q9H579 483 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
PDLIM7-205ENST00000393551 ERC2O15083 957 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 FOXP2O15409 715 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 PRDM1O75626 825 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 GNAT2P19087 354 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 ZMYM1Q5SVZ6 1142 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 OLFML2BQ68BL8 750 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 NUP88Q99567 741 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 MKNK2Q9HBH9 465 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 GOPCQ9HD26 462 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 NYAP2Q9P242 653 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 DDX20Q9UHI6 824 aaKnown RBP21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 PPP1R9AQ9ULJ8 1098 aa21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 ZMYND8Q9ULU4 1186 aaPredicted RBP21.82■■□□□ 1.08
PDLIM7-205ENST00000393551 LAMA2P24043 3122 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 SMCHD1A6NHR9 2005 aa21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 VWA5AO00534 786 aa21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 TDO2P48775 406 aa21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 ABRAQ8N0Z2 381 aa21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 ZNF214Q9UL59 606 aaPredicted RBP21.81■■□□□ 1.08
PDLIM7-205ENST00000393551 PLXNA1Q9UIW2 1896 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 APPP05067 770 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 LRRC26Q2I0M4 334 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 RIOX2Q8IUF8 465 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 GDF15Q99988 308 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 FSD1Q9BTV5 496 aa21.8■■□□□ 1.08
PDLIM7-205ENST00000393551 F5H6K3 240 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 RAD21O60216 631 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 NDUFB10O96000 172 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 SYN1P17600 705 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 CNGA1P29973 690 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 KLRC3Q07444 240 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 PRAMEF19Q5SWL8 479 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 MAML3Q96JK9 1138 aa21.79■■□□□ 1.08
PDLIM7-205ENST00000393551 ANKRD45Q5TZF3 282 aa21.78■■□□□ 1.08
PDLIM7-205ENST00000393551 CCDC129Q6ZRS4 1044 aa21.78■■□□□ 1.08
PDLIM7-205ENST00000393551 MKL1Q969V6 931 aa21.78■■□□□ 1.08
PDLIM7-205ENST00000393551 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
PDLIM7-205ENST00000393551 CLIP2Q9UDT6 1046 aa21.78■■□□□ 1.08
PDLIM7-205ENST00000393551 SOX1O00570 391 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 SLC25A27O95847 323 aa21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 PGK2P07205 417 aa21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 FCER1AP12319 257 aa21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 STAT3P40763 770 aa21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 HDAC1Q13547 482 aaPredicted RBP21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 MTMR4Q9NYA4 1195 aa21.77■■□□□ 1.08
PDLIM7-205ENST00000393551 A0A1W2PPC1 479 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 MSCO60682 206 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 ANO1Q5XXA6 986 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 ZNF444Q8N0Y2 327 aaPredicted RBP21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 SLF1Q9BQI6 1058 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 RIPK3Q9Y572 518 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 TACC3Q9Y6A5 838 aa21.76■■□□□ 1.07
PDLIM7-205ENST00000393551 PLIN4Q96Q06 1357 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 COL6A3P12111 3177 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 BMP8BP34820 402 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 PDE1AP54750 535 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 PPARAQ07869 468 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 ZNF792Q3KQV3 632 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 FAM47AQ5JRC9 791 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 NEDD1Q8NHV4 660 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 MMP19Q99542 508 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 SENP6Q9GZR1 1112 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 INCENPQ9NQS7 918 aa21.75■■□□□ 1.07
PDLIM7-205ENST00000393551 DNM1LO00429 736 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 SEPT4O43236 478 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 MAGEA10P43363 369 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 GJC2Q5T442 439 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 VPS53Q5VIR6 699 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 LRRC47Q8N1G4 583 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 NACAP1Q9BZK3 213 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 NAPBQ9H115 298 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 SLC5A4Q9NY91 659 aa21.74■■□□□ 1.07
PDLIM7-205ENST00000393551 PRPF38AQ8NAV1 312 aaKnown RBP21.73■■□□□ 1.07
PDLIM7-205ENST00000393551 YTHDC1Q96MU7 727 aaKnown RBP21.73■■□□□ 1.07
PDLIM7-205ENST00000393551 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
PDLIM7-205ENST00000393551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM7-205ENST00000393551 TTLL1O95922 423 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 TAL1P17542 331 aaPredicted RBP21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 TFAP4Q01664 338 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 CTDSPL2Q05D32 466 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 PDE4BQ07343 736 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 GMCL1P1Q8NEA9 526 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 EVI5LQ96CN4 794 aa21.72■■□□□ 1.07
PDLIM7-205ENST00000393551 ATP2A1O14983 1001 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 TSPY3P0CV98 308 aa21.71■■□□□ 1.07
PDLIM7-205ENST00000393551 TSPY8P0CW00 308 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms