RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 PPP2R2CQ9Y2T4 447 aa13.26□□□□□ -0.29
RAPGEF3-201ENST00000389212 DUOX1Q9NRD9 1551 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 GRIK5Q16478 980 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 SETDB2Q96T68 719 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 CXorf56Q9H5V9 222 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 KIF2AO00139 706 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 CYP2C19P33261 490 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 CCT6AP40227 531 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 PLCD1P51178 756 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 DIXDC1Q155Q3 683 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 NT5DC1Q5TFE4 455 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 WDR24Q96S15 920 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 PLIN2Q99541 437 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 CPVLQ9H3G5 476 aa13.25□□□□□ -0.29
RAPGEF3-201ENST00000389212 IL17AQ16552 155 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 CTNND2Q9UQB3 1225 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SOWAHDA6NJG2 315 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SATB1Q01826 763 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 GNG11P61952 73 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 TBX2Q13207 712 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 TNFRSF25Q93038 417 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 DACH1Q9UI36 760 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 FAM205AQ6ZU69 1335 aa13.24□□□□□ -0.29
RAPGEF3-201ENST00000389212 SCG2P13521 617 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 TFAP4Q01664 338 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ARHGAP29Q52LW3 1261 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 TXLNBQ8N3L3 684 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 C8orf37Q96NL8 207 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 SAP30BPQ9UHR5 308 aaKnown RBP13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 XDHP47989 1333 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 MNAT1P51948 309 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 RCAN1P53805 252 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 CUL4BQ13620 913 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 IRF6O14896 467 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 MAP2K2P36507 400 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 RCSD1Q6JBY9 416 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 MTRQ99707 1265 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ZNF446Q9NWS9 450 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
RAPGEF3-201ENST00000389212 ZPR1O75312 459 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 GOLGA8HP0CJ92 632 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 USP5P45974 858 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 RBL2Q08999 1139 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 NR1I3Q14994 352 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 KANK3Q6NY19 840 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 SPATA20Q8TB22 786 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 SH3RF3Q8TEJ3 882 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 MRPL44Q9H9J2 332 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 LZTFL1Q9NQ48 299 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 DDAH1O94760 285 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 KCNA4P22459 653 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 KCNJ6P48051 423 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 RRAGBQ5VZM2 374 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 IGSF22Q8N9C0 903 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 EEF2KMTQ96G04 330 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 ZSWIM4Q9H7M6 989 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 RRP15Q9Y3B9 282 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
RAPGEF3-201ENST00000389212 PPP1R3GB7ZBB8 358 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 NFIXQ14938 502 aa13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-201ENST00000389212 TRIML1Q8N9V2 468 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms