RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 FANCCQ00597 558 aa14.38□□□□□ -0.11
VPS16-202ENST00000380445 SLC44A5Q8NCS7 719 aa14.38□□□□□ -0.11
VPS16-202ENST00000380445 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
VPS16-202ENST00000380445 MAN1B1Q9UKM7 699 aa14.38□□□□□ -0.11
VPS16-202ENST00000380445 PALM3A6NDB9 673 aaPredicted RBP14.37□□□□□ -0.11
VPS16-202ENST00000380445 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 SRGNP10124 158 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
VPS16-202ENST00000380445 STAG2Q8N3U4 1231 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 CCDC150Q8NCX0 1101 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 LTBP1Q14766 1721 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 SPATA20Q8TB22 786 aa14.37□□□□□ -0.11
VPS16-202ENST00000380445 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
VPS16-202ENST00000380445 SYMPKQ92797 1274 aaKnown RBP14.37□□□□□ -0.11
VPS16-202ENST00000380445 FOXN1O15353 648 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 SERPINC1P01008 464 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 SKILP12757 684 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 MORC3Q14149 939 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 DHX58Q96C10 678 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
VPS16-202ENST00000380445 UBASH3AP57075 661 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 USP49Q70CQ1 688 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 EPSTI1Q96J88 318 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 DAGLAQ9Y4D2 1042 aa14.36□□□□□ -0.11
VPS16-202ENST00000380445 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 VWA3AA6NCI4 1184 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 KIF20AO95235 890 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 PARP1P09874 1014 aaKnown RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 DDX60LQ5H9U9 1706 aaKnown RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 RIMBP2O15034 1052 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 ERCC5P28715 1186 aaPredicted RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 DPP8Q6V1X1 898 aaPredicted RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 TMC6Q7Z403 805 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 IQUBQ8NA54 791 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 ENOX1Q8TC92 643 aaKnown RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 GSDMAQ96QA5 445 aa14.35□□□□□ -0.11
VPS16-202ENST00000380445 GTPBP4Q9BZE4 634 aaKnown RBP14.35□□□□□ -0.11
VPS16-202ENST00000380445 G3V3G9 751 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 BMP6P22004 513 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 MCM7P33993 719 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 TXLNAP40222 546 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 COL23A1Q86Y22 540 aaPredicted RBP14.34□□□□□ -0.11
VPS16-202ENST00000380445 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
VPS16-202ENST00000380445 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 MYH1P12882 1939 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 VEGFAP15692 232 aaPredicted RBP14.34□□□□□ -0.11
VPS16-202ENST00000380445 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS16-202ENST00000380445 LONP1P36776 959 aaKnown RBP14.34□□□□□ -0.11
VPS16-202ENST00000380445 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
VPS16-202ENST00000380445 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 SH3RF1Q7Z6J0 888 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 PAGE5Q96GU1 130 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 MASTLQ96GX5 879 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 NRXN2Q9P2S2 1712 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 WNT7AO00755 349 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 CYTH3O43739 400 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 APBA3O96018 575 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS16-202ENST00000380445 NOVP48745 357 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 TPD52L1Q16890 204 aaPredicted RBP14.34□□□□□ -0.11
VPS16-202ENST00000380445 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 CFAP100Q494V2 611 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
VPS16-202ENST00000380445 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
VPS16-202ENST00000380445 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 M0R2N6 131 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 LAD1O00515 517 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 ATP1A3P13637 1013 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 CCZ1BP86790 482 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 CCZ1P86791 482 aaPredicted RBP14.33□□□□□ -0.12
VPS16-202ENST00000380445 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
VPS16-202ENST00000380445 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
VPS16-202ENST00000380445 STXBP3O00186 592 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 GNA11P29992 359 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 CEP95Q96GE4 821 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 TMEM51Q9NW97 253 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 SWAP70Q9UH65 585 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 TTF2Q9UNY4 1162 aaKnown RBP14.33□□□□□ -0.12
VPS16-202ENST00000380445 MTMR7Q9Y216 660 aa14.33□□□□□ -0.12
VPS16-202ENST00000380445 PLIN4Q96Q06 1357 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 A0A087X0B3 334 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 hCG_1984214I3L0E3 225 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
VPS16-202ENST00000380445 AFMP43652 599 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 ARID5BQ14865 1188 aa14.32□□□□□ -0.12
VPS16-202ENST00000380445 GRAMD1CQ8IYS0 662 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms