RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 DCAF8Q5TAQ9 597 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 ARL6IP4Q66PJ3 421 aaKnown RBP26.37■■□□□ 1.81
VPS16-201ENST00000380443 IMPACTQ9P2X3 320 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 PCDHA5Q9Y5H7 936 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 C10orf71Q711Q0 1435 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 STAG2Q8N3U4 1231 aa26.37■■□□□ 1.81
VPS16-201ENST00000380443 FAM205CA6NFA0 338 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 TPM2P07951 284 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 PARP1P09874 1014 aaKnown RBP26.36■■□□□ 1.81
VPS16-201ENST00000380443 SARSP49591 514 aaKnown RBP26.36■■□□□ 1.81
VPS16-201ENST00000380443 GRIN1Q05586 938 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 NCAPHQ15003 741 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 PPP4R3BQ5MIZ7 849 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 MLKLQ8NB16 471 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 BARHL2Q9NY43 387 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 SERTAD1Q9UHV2 236 aa26.36■■□□□ 1.81
VPS16-201ENST00000380443 TTF2Q9UNY4 1162 aaKnown RBP26.36■■□□□ 1.81
VPS16-201ENST00000380443 A0A087WWV3 80 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 ACTN4O43707 911 aaKnown RBP26.35■■□□□ 1.81
VPS16-201ENST00000380443 SMC2O95347 1197 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 MYL5Q02045 173 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 GABPAQ06546 454 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 SMARCE1Q969G3 411 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 GSDMDP57764 484 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 PIK3AP1Q6ZUJ8 805 aa26.35■■□□□ 1.81
VPS16-201ENST00000380443 COL11A2P13942 1736 aaPredicted RBP26.34■■□□□ 1.81
VPS16-201ENST00000380443 KLRF2D3W0D1 207 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 H0YIN7 160 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 hCG_1984214I3L0E3 225 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 SLFN14P0C7P3 912 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 HDLBPQ00341 1268 aaKnown RBP26.34■■□□□ 1.81
VPS16-201ENST00000380443 ZNF174Q15697 407 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 SPECC1Q5M775 1068 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 FOXP4Q8IVH2 680 aaPredicted RBP26.34■■□□□ 1.81
VPS16-201ENST00000380443 CERS5Q8N5B7 392 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 ZNF713Q8N859 430 aaPredicted RBP26.34■■□□□ 1.81
VPS16-201ENST00000380443 SPATA20Q8TB22 786 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 FBXW7Q969H0 707 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 TEKT1Q969V4 418 aa26.34■■□□□ 1.81
VPS16-201ENST00000380443 M0R2N6 131 aa26.33■■□□□ 1.81
VPS16-201ENST00000380443 PTGDRQ13258 359 aa26.33■■□□□ 1.81
VPS16-201ENST00000380443 CBFA2T2O43439 604 aa26.32■■□□□ 1.8
VPS16-201ENST00000380443 C2CD5Q86YS7 1000 aa26.32■■□□□ 1.8
VPS16-201ENST00000380443 USP40Q9NVE5 1235 aa26.32■■□□□ 1.8
VPS16-201ENST00000380443 CEP95Q96GE4 821 aa26.32■■□□□ 1.8
VPS16-201ENST00000380443 MAN1B1Q9UKM7 699 aa26.32■■□□□ 1.8
VPS16-201ENST00000380443 CCDC194A0A1B0GVG4 234 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 STXBP3O00186 592 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 LAD1O00515 517 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 CYTH3O43739 400 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 LONP1P36776 959 aaKnown RBP26.31■■□□□ 1.8
VPS16-201ENST00000380443 TGFB2P61812 414 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 MORC3Q14149 939 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 WWC2Q6AWC2 1192 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 SH3RF1Q7Z6J0 888 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 CNKSR1Q969H4 720 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 ZNF622Q969S3 477 aaKnown RBP eCLIP26.31■■□□□ 1.8
VPS16-201ENST00000380443 RRP36Q96EU6 259 aaKnown RBP26.31■■□□□ 1.8
VPS16-201ENST00000380443 OSBPL5Q9H0X9 879 aaPredicted RBP26.31■■□□□ 1.8
VPS16-201ENST00000380443 NRBP1Q9UHY1 535 aa26.31■■□□□ 1.8
VPS16-201ENST00000380443 HLA-DOAP06340 250 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 STRIP1Q5VSL9 837 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 CC2D2BQ6DHV5 1058 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 SYMPKQ92797 1274 aaKnown RBP26.3■■□□□ 1.8
VPS16-201ENST00000380443 MTMR4Q9NYA4 1195 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 PYCARDQ9ULZ3 195 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 KIF13BQ9NQT8 1826 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 IGKV6D-41A0A0C4DH26 115 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 GNA11P29992 359 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 DOK7Q18PE1 504 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 ASPRV1Q53RT3 343 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 ZMYND12Q9H0C1 365 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 EHD4Q9H223 541 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 SERPINB13Q9UIV8 391 aa26.3■■□□□ 1.8
VPS16-201ENST00000380443 VEGFAP15692 232 aaPredicted RBP26.29■■□□□ 1.8
VPS16-201ENST00000380443 LRRC8AQ8IWT6 810 aa26.29■■□□□ 1.8
VPS16-201ENST00000380443 NLGN2Q8NFZ4 835 aa26.29■■□□□ 1.8
VPS16-201ENST00000380443 GPKOWQ92917 476 aaPredicted RBP eCLIP26.29■■□□□ 1.8
VPS16-201ENST00000380443 ZDHHC15Q96MV8 337 aa26.29■■□□□ 1.8
VPS16-201ENST00000380443 SEC63Q9UGP8 760 aaKnown RBP26.29■■□□□ 1.8
VPS16-201ENST00000380443 NPM3O75607 178 aaKnown RBP26.28■■□□□ 1.8
VPS16-201ENST00000380443 ORC2Q13416 577 aaPredicted RBP26.28■■□□□ 1.8
VPS16-201ENST00000380443 SLC35G1Q2M3R5 365 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 KRT25Q7Z3Z0 450 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 HEATR3Q7Z4Q2 680 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 IQUBQ8NA54 791 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 C6orf50Q9HD87 102 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 PCDHA6Q9UN73 950 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 PCDHA8Q9Y5H6 950 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 ESYT2A0FGR8 921 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 ERCC5P28715 1186 aaPredicted RBP26.28■■□□□ 1.8
VPS16-201ENST00000380443 FANCCQ00597 558 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 PICALMQ13492 652 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 CCDC144BQ3MJ40 725 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 APOBEC3HQ6NTF7 200 aaKnown RBP26.28■■□□□ 1.8
VPS16-201ENST00000380443 CDC42EP5Q6NZY7 148 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 USP49Q70CQ1 688 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 ENOX1Q8TC92 643 aaKnown RBP26.28■■□□□ 1.8
VPS16-201ENST00000380443 EPSTI1Q96J88 318 aa26.28■■□□□ 1.8
VPS16-201ENST00000380443 CCDC17Q96LX7 622 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms