RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 ZNF236Q9UL36 1845 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 HOXC6P09630 235 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 TMEM132BQ14DG7 1078 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 NCAPG2Q86XI2 1143 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 CEP95Q96GE4 821 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 CLIP2Q9UDT6 1046 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 PPP1R9AQ9ULJ8 1098 aa28.35■■■□□ 2.13
CDKN2A-203ENST00000380151 NDUFB10O96000 172 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 SLC3A2P08195 630 aaKnown RBP28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 ADORA2AP29274 412 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 PDE4BQ07343 736 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 VPS53Q5VIR6 699 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 MFSD14CQ5VZR4 134 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 ANKLE1Q8NAG6 615 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 PLIN4Q96Q06 1357 aa28.34■■■□□ 2.13
CDKN2A-203ENST00000380151 A0A0D9SFI3 127 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 F5H6K3 240 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 KLRC3Q07444 240 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 FAM47AQ5JRC9 791 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 CHD1LQ86WJ1 897 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 FAM227BQ96M60 508 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 MROH8Q9H579 483 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 OGDHLQ9ULD0 1010 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 ADAMTS5Q9UNA0 930 aa28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 SUPT16HQ9Y5B9 1047 aaKnown RBP28.33■■■□□ 2.13
CDKN2A-203ENST00000380151 CEP290O15078 2479 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 COL11A1P12107 1806 aaPredicted RBP28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 TSPY3P0CV98 308 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 TSPY8P0CW00 308 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 NECAB2Q7Z6G3 386 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 DPP9Q86TI2 863 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 LRRC47Q8N1G4 583 aaKnown RBP28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 HELLSQ9NRZ9 838 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 MTMR4Q9NYA4 1195 aa28.32■■■□□ 2.12
CDKN2A-203ENST00000380151 MYH4Q9Y623 1939 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 TRIM6-TRIM34B2RNG4 842 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 VWA5AO00534 786 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 STRNO43815 780 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 MNX1P50219 401 aaPredicted RBP28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 NUCB1Q02818 461 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 CTDSPL2Q05D32 466 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 NEDD1Q8NHV4 660 aa28.31■■■□□ 2.12
CDKN2A-203ENST00000380151 TTLL1O95922 423 aa28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 CYP2C19P33261 490 aa28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 TFAP4Q01664 338 aa28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 HABP4Q5JVS0 413 aaKnown RBP28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 RILPL2Q969X0 211 aa28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 SLF1Q9BQI6 1058 aa28.3■■■□□ 2.12
CDKN2A-203ENST00000380151 COBLO75128 1261 aa28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 SLC25A27O95847 323 aa28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 NMIQ13287 307 aaPredicted RBP28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 PLEKHM2Q8IWE5 1019 aa28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 REPS2Q8NFH8 660 aa28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 ZNF214Q9UL59 606 aaPredicted RBP28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.29■■■□□ 2.12
CDKN2A-203ENST00000380151 MCMDC2Q4G0Z9 681 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 LHX8Q68G74 356 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 RIOX2Q8IUF8 465 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 ABRAQ8N0Z2 381 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 MKL1Q969V6 931 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 NBPF3Q9H094 633 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 INCENPQ9NQS7 918 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 COLQQ9Y215 455 aaPredicted RBP28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 NR2E3Q9Y5X4 410 aa28.28■■■□□ 2.12
CDKN2A-203ENST00000380151 EVI5O60447 810 aa28.27■■■□□ 2.12
CDKN2A-203ENST00000380151 STAT3P40763 770 aa28.27■■■□□ 2.12
CDKN2A-203ENST00000380151 ZNF589Q86UQ0 364 aaPredicted RBP28.27■■■□□ 2.12
CDKN2A-203ENST00000380151 C11orf49Q9H6J7 331 aa28.27■■■□□ 2.12
CDKN2A-203ENST00000380151 IGHA2P01877 340 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 FCER1AP12319 257 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 OLFML2BQ68BL8 750 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 GMCL1P1Q8NEA9 526 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 TRPV1Q8NER1 839 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 MMP19Q99542 508 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 SYNPO2Q9UMS6 1093 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 TACC3Q9Y6A5 838 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 ALPK3Q96L96 1907 aa28.26■■■□□ 2.11
CDKN2A-203ENST00000380151 TSPY2A6NKD2 308 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 CNGA1P29973 690 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 ALX1Q15699 326 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 CHRDL2Q6WN34 429 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 TICAM2Q86XR7 235 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 SLC5A4Q9NY91 659 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 ANAPC4Q9UJX5 808 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 FRMPD3Q5JV73 1810 aa28.25■■■□□ 2.11
CDKN2A-203ENST00000380151 CYBAP13498 195 aa28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 SLFN13Q68D06 897 aa28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 KIFC2Q96AC6 838 aa28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 TEX13BQ9BXU2 312 aa28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 OSBPL3Q9H4L5 887 aa28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 DDX20Q9UHI6 824 aaKnown RBP28.24■■■□□ 2.11
CDKN2A-203ENST00000380151 PFASO15067 1338 aa28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 CCDC171Q6TFL3 1326 aa28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 HSPD1P10809 573 aaKnown RBP28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 SNRNP48Q6IEG0 339 aaKnown RBP28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 PRPF38AQ8NAV1 312 aaKnown RBP28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 ISY1Q9ULR0 285 aaKnown RBP28.23■■■□□ 2.11
CDKN2A-203ENST00000380151 RANBP6O60518 1105 aaKnown RBP28.22■■■□□ 2.11
CDKN2A-203ENST00000380151 NMT2O60551 498 aa28.22■■■□□ 2.11
CDKN2A-203ENST00000380151 FGAP02671 866 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms