RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CTDP1Q9Y5B0 961 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 GREB1LQ9C091 1923 aaPredicted RBP13.72□□□□□ -0.21
SMARCE1-203ENST00000377808 KIAA0100Q14667 2235 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 IGKV6D-41A0A0C4DH26 115 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 F5H6K3 240 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 KLRC3Q07444 240 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 TRIM32Q13049 653 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 TTC22Q5TAA0 569 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 TRIB2Q92519 343 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 APBA2Q99767 749 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
SMARCE1-203ENST00000377808 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.22
SMARCE1-203ENST00000377808 MYH4Q9Y623 1939 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 GJB1P08034 283 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 ERCC3P19447 782 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 GJA8P48165 433 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 SLC4A3P48751 1232 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 MAP2K5Q13163 448 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 ALX1Q15699 326 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 MORN1Q5T089 497 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 SLFN13Q68D06 897 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 DEFB118Q96PH6 123 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 PPP1R9AQ9ULJ8 1098 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 PLXNB2O15031 1838 aa13.7□□□□□ -0.22
SMARCE1-203ENST00000377808 SLC15A5A6NIM6 579 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 NMT2O60551 498 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 GSPT1P15170 499 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 PTPREP23469 700 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 CCL14Q16627 93 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 DPP9Q86TI2 863 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 TRMT44Q8IYL2 757 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 HMX1Q9NP08 348 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-203ENST00000377808 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 VWA5AO00534 786 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 ZNF213O14771 459 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 GRB14Q14449 540 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 MKL1Q969V6 931 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 TACC3Q9Y6A5 838 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 ZMYM6O95789 1325 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
SMARCE1-203ENST00000377808 ORC4O43929 436 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 ZBED4O75132 1171 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 SGPL1O95470 568 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 SLC25A27O95847 323 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 BMP3P12645 472 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 ADORA2AP29274 412 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 STAT3P40763 770 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 SLC1A4P43007 532 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 MFSD14CQ5VZR4 134 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 GMCL1P1Q8NEA9 526 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 SHCBP1Q8NEM2 672 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 USP6NLQ92738 828 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 MMP19Q99542 508 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 RNF41Q9H4P4 317 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 MROH8Q9H579 483 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 FEM1BQ9UK73 627 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 RLFQ13129 1914 aa13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 MKI67P46013 3256 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-203ENST00000377808 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 MCCP23508 829 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 PRPF38AQ8NAV1 312 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 NPLOC4Q8TAT6 608 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 SYNPO2Q9UMS6 1093 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 PARP14Q460N5 1801 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 NEDD4P46934 1319 aa13.66□□□□□ -0.22
SMARCE1-203ENST00000377808 STRNO43815 780 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 FCER1AP12319 257 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 CNGA1P29973 690 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 CCND3P30281 292 aaPredicted RBP13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 STAT2P52630 851 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 IMMTQ16891 758 aaKnown RBP13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
SMARCE1-203ENST00000377808 RIOX2Q8IUF8 465 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms