RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SLC20A2	Q08357	652 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	CCDC183	Q5T5S1	534 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	CCAR1	Q8IX12	1150 aa	Known RBP	13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	SWAP70	Q9UH65	585 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	LIG1	P18858	919 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	HDLBP	Q00341	1268 aa	Known RBP	13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	TNIP1	Q15025	636 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	MYCBP	Q99417	103 aa	Predicted RBP	13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	NRXN2	Q9P2S2	1712 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	MIGA2	Q7L4E1	593 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	CKAP2L	Q8IYA6	745 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	FSIP1	Q8NA03	581 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	DRC1	Q96MC2	740 aa		13.36	□□□□□ -0.27
LMO7-204	ENST00000377499	IRF6	O14896	467 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	SPTLC2	O15270	562 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	ZRSR1	Q15695	479 aa	Known RBP	13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	NUP62CL	Q9H1M0	184 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	TNMD	Q9H2S6	317 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	FAM198A	Q9UFP1	575 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	CD2AP	Q9Y5K6	639 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	MMP1	P03956	469 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	KRT2	P35908	639 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	RCAN1	P53805	252 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	ANO1	Q5XXA6	986 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	EGFL6	Q8IUX8	553 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	STK36	Q9NRP7	1315 aa		13.35	□□□□□ -0.27
LMO7-204	ENST00000377499	USP17L5	A8MUK1	530 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	PRPF3	O43395	683 aa	Known RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	KIN	O60870	393 aa	Known RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SCG2	P13521	617 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	FKBP1A	P62942	108 aa	Known RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	NBPF11	Q86T75	865 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	TMEM87A	Q8NBN3	555 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SDF4	Q9BRK5	362 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	RGPD4	Q7Z3J3	1758 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	TTLL1	O95922	423 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	VIL1	P09327	827 aa	Known RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	NOSTRIN	Q8IVI9	506 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	OXER1	Q8TDS5	423 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SPDYE2B	A6NHP3	402 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SLFN14	P0C7P3	912 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SPDYE6	P0CI01	402 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	SEMA3F	Q13275	785 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	ABCB5	Q2M3G0	1257 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	JMY	Q8N9B5	988 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	MTMR4	Q9NYA4	1195 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	ZNF70	Q9UC06	446 aa	Predicted RBP	13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	UTRN	P46939	3433 aa		13.34	□□□□□ -0.27
LMO7-204	ENST00000377499	RRP36	Q96EU6	259 aa	Known RBP	13.33	□□□□□ -0.27
LMO7-204	ENST00000377499	PGBD1	Q96JS3	809 aa		13.33	□□□□□ -0.27
LMO7-204	ENST00000377499	TSPY26P	Q9H489	355 aa		13.33	□□□□□ -0.27
LMO7-204	ENST00000377499		A0A1B0GVL5	298 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	SHTN1	A0MZ66	631 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	NAPA	P54920	295 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	SEPT2	Q15019	361 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	ZYX	Q15942	572 aa	Known RBP	13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	NBPF9	Q3BBW0	867 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	KCNG4	Q8TDN1	519 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	RBSN	Q9H1K0	784 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	NFKBIE	O00221	500 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	SHMT1	P34896	483 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	ATL3	Q6DD88	541 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	KCTD1	Q719H9	257 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC17	Q96LX7	622 aa		13.33	□□□□□ -0.28
LMO7-204	ENST00000377499	SLC16A2	P36021	539 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	ICA1	Q05084	483 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	GRM4	Q14833	912 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	MRI	Q9BWK5	157 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	TMEM39B	Q9GZU3	492 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	TCP11L1	Q9NUJ3	509 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC39	Q9UFE4	941 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	RCOR1	Q9UKL0	485 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	LRRC37A	A6NMS7	1700 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	NR1I2	O75469	434 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	GH2	P01242	217 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	PIK3AP1	Q6ZUJ8	805 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	SAMD7	Q7Z3H4	446 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	IDI2	Q9BXS1	227 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	OGFR	Q9NZT2	677 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	PCDHA7	Q9UN72	937 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	ELP1	O95163	1332 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	CNTNAP5	Q8WYK1	1306 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	ROBO3	Q96MS0	1386 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	SLC1A4	P43007	532 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	LRSAM1	Q6UWE0	723 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	MYOZ2	Q9NPC6	264 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	RTEL1	Q9NZ71	1219 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	MAD2L2	Q9UI95	211 aa		13.32	□□□□□ -0.28
LMO7-204	ENST00000377499	MAST2	Q6P0Q8	1798 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	CCDC194	A0A1B0GVG4	234 aa		13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	VEGFA	P15692	232 aa	Predicted RBP	13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	GMPS	P49915	693 aa	Predicted RBP	13.31	□□□□□ -0.28
LMO7-204	ENST00000377499	MAP3K11	Q16584	847 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms